RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MAPKAPK3Q16644 382 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 TMIGD1Q6UXZ0 262 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 Q6ZPB1 254 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-207ENST00000531727 SIAH3Q8IW03 269 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 ARMC10Q8N2F6 343 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 SEC16BQ96JE7 1060 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 FAR2Q96K12 515 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 KRT12Q99456 494 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 NPLQ9BXD5 320 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-207ENST00000531727 TRIM45Q9H8W5 580 aaPredicted RBP15.74■□□□□ 0.11
CPSF1-207ENST00000531727 SMYD2Q9NRG4 433 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 TINAGQ9UJW2 476 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 NPIPA1Q9UND3 350 aa15.74■□□□□ 0.11
CPSF1-207ENST00000531727 MYO7BQ6PIF6 2116 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 LRBAP50851 2863 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 NCF1BA6NI72 391 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 A8MUA0 341 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 NCF1CA8MVU1 366 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 FCHO1O14526 889 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 PIAS1O75925 651 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 NCF1P14598 390 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 HNRNPH1P31943 449 aaKnown RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 TRHRP34981 398 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 CYB561P49447 251 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 HLCSP50747 726 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 NAA30Q147X3 362 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 TERF2Q15554 542 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 CAPN12Q6ZSI9 719 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 ZNF227Q86WZ6 799 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 SPPL2CQ8IUH8 684 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 SRRM1Q8IYB3 904 aaKnown RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 KRT78Q8N1N4 520 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 TCAIMQ8N3R3 496 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 APCDD1LQ8NCL9 501 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 BBOF1Q8ND07 529 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 B3GNT7Q8NFL0 401 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 PYROXD1Q8WU10 500 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 MS4A6EQ96DS6 147 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 PDLIM2Q96JY6 352 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 CAPS2Q9BXY5 557 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 DEFB126Q9BYW3 111 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 PITHD1Q9GZP4 211 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 RUBCNLQ9H714 662 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 NT5DC2Q9H857 520 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 GPRC5BQ9NZH0 403 aa15.73■□□□□ 0.11
CPSF1-207ENST00000531727 MTO1Q9Y2Z2 717 aaKnown RBP15.73■□□□□ 0.11
CPSF1-207ENST00000531727 A0A0G2JN53 185 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 LRIT2A6NDA9 550 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 ERI3O43414 337 aaKnown RBP15.72■□□□□ 0.11
CPSF1-207ENST00000531727 ASNA1O43681 348 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 ESRRAP11474 423 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-207ENST00000531727 HTR1EP28566 365 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 SSTR1P30872 391 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 GGT5P36269 586 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 ADORA2A-AS1P86434 159 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 RUNX2Q13950 521 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 ZNF630Q2M218 657 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-207ENST00000531727 XKRXQ6PP77 449 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 SCUBE1Q8IWY4 988 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 MCEMP1Q8IX19 187 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 GHDCQ8N2G8 530 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 CCT6BQ92526 530 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 TMEM125Q96AQ2 219 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 TSPAN17Q96FV3 270 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 QRFPRQ96P65 431 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 TMEM79Q9BSE2 394 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 EHD1Q9H4M9 534 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 CNOT10Q9H9A5 744 aaKnown RBP15.72■□□□□ 0.11
CPSF1-207ENST00000531727 CAB39LQ9H9S4 337 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 CHST11Q9NPF2 352 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 WWOXQ9NZC7 414 aa15.72■□□□□ 0.11
CPSF1-207ENST00000531727 MYO9AB2RTY4 2548 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 A0A088AWK7 358 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 TRBV11-1A0A0K0K1C0 115 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CXorf49A8MYA2 514 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-207ENST00000531727 TAPBPO15533 448 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CLEC3AO75596 197 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 MYO1DO94832 1006 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 TBX6O95947 436 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CCDC166P0CW27 439 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 ZNF24P17028 368 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 AGAP20933 346 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 ZNF10P21506 573 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-207ENST00000531727 HPDP32754 393 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CLCN2P51788 898 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 SMSP52788 366 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 HSD17B7P56937 341 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 RAB38P57729 211 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CALCOCO2Q13137 446 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 ADPRMQ3LIE5 342 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 RNFT1Q5M7Z0 435 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CDKL4Q5MAI5 379 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 VN1R5Q7Z5H4 357 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 GPSM1Q86YR5 675 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 SPATA6LQ8N4H0 392 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CPSF7Q8N684 471 aaKnown RBP15.71■□□□□ 0.11
CPSF1-207ENST00000531727 OR2L5Q8NG80 312 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 ADAMTS18Q8TE60 1221 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 CDKL2Q92772 493 aa15.71■□□□□ 0.11
CPSF1-207ENST00000531727 GPR22Q99680 433 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms