RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CHSY3Q70JA7 882 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 HOMEZQ8IX15 550 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 RNF175Q8N4F7 328 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 METTL27Q8N6F8 245 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-206ENST00000531480 CDYL2Q8N8U2 506 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 STT3BQ8TCJ2 826 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 DYDC1Q8WWB3 177 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 STARD8Q92502 1023 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 KCNC2Q96PR1 638 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 OR1F2PQ96R84 312 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 F2RL3Q96RI0 385 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 TBCDQ9BTW9 1192 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 NPLQ9BXD5 320 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-206ENST00000531480 TNFRSF12AQ9NP84 129 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 MID1IP1Q9NPA3 183 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 C14orf105Q9NVL8 296 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 PADI2Q9Y2J8 665 aa13.69□□□□□ -0.22
CPSF1-206ENST00000531480 MRPS18BQ9Y676 258 aaKnown RBP13.69□□□□□ -0.22
CPSF1-206ENST00000531480 NBEAQ8NFP9 2946 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 PCSK5Q92824 1860 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 ZNF891A8MT65 544 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-206ENST00000531480 SGK494L7N484 410 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 MANBAO00462 879 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 FFAR3O14843 346 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 GPR42O15529 346 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 RDH16O75452 317 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 BMP10O95393 424 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 ETHE1O95571 254 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 B3GALT4O96024 378 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 TGFB1P01137 390 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 PDYNP01213 254 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 UMODP07911 640 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 ZGLP1P0C6A0 271 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 FOXA1P55317 472 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 RAB8AP61006 207 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 RPS13P62277 151 aaKnown RBP13.68□□□□□ -0.22
CPSF1-206ENST00000531480 MC1RQ01726 317 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 VAC14Q08AM6 782 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 IFT88Q13099 833 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 SLC9A5Q14940 896 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 UGT8Q16880 541 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 MLIPQ5VWP3 458 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 TRIM40Q6P9F5 258 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 ZNF793Q6ZN11 406 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 ZC3H7AQ8IWR0 971 aaKnown RBP13.68□□□□□ -0.22
CPSF1-206ENST00000531480 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 CCT6BQ92526 530 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 COL26A1Q96A83 441 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 SERINC2Q96SA4 455 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 SERPINI1Q99574 410 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 ROGDIQ9GZN7 287 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 OR51B5Q9H339 312 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 ELOVL6Q9H5J4 265 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 PRORYQ9H606 182 aa13.68□□□□□ -0.22
CPSF1-206ENST00000531480 FARSBQ9NSD9 589 aaKnown RBP13.68□□□□□ -0.22
CPSF1-206ENST00000531480 GPN3Q9UHW5 284 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-206ENST00000531480 A0A088AWK7 358 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 A0A1W2PQ72 361 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 NPIPB8E9PQR5 432 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 PLPP1O14494 284 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 DNAJB6O75190 326 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 ULK1O75385 1050 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 SNUPNO95149 360 aaKnown RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 KRT6AP02538 564 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 KRT6BP04259 564 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 SERPINE1P05121 402 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 CHRNGP07510 517 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 UROSP10746 265 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 ZNF10P21506 573 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 ARL1P40616 181 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 KRT6CP48668 564 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 PLA2G16P53816 162 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 MTTPP55157 894 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 RPS18P62269 152 aaKnown RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 OCA2Q04671 838 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 TGM3Q08188 693 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 CSTF3Q12996 717 aaKnown RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 IL10RAQ13651 578 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 SSPNQ14714 243 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 UGT3A2Q3SY77 523 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 ARL13AQ5H913 290 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 TCHHL1Q5QJ38 904 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 FAM219BQ5XKK7 198 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 ZCCHC23Q6ZST2 131 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 TRIM46Q7Z4K8 759 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 CUZD1Q86UP6 607 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 TMEM151BQ8IW70 566 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 SHISA5Q8N114 240 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 ZCCHC7Q8N3Z6 543 aaKnown RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 GBP7Q8N8V2 638 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 OR5T3Q8NGG3 340 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 OR51Q1Q8NH59 317 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 METTL6Q8TCB7 284 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 RGMAQ96B86 450 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 C11orf24Q96F05 449 aaPredicted RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 KCNA7Q96RP8 456 aa13.67□□□□□ -0.22
CPSF1-206ENST00000531480 DDX31Q9H8H2 851 aaKnown RBP13.67□□□□□ -0.22
CPSF1-206ENST00000531480 CPNE5Q9HCH3 593 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms