RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 PAGE2BQ5JRK9 111 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 GRHL2Q6ISB3 625 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 MED27Q6P2C8 311 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 NDUFAF7Q7L592 441 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 ANKRD37Q7Z713 158 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 LAS2Q8IYD9 372 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 RBMXL3Q8N7X1 1067 aaKnown RBP17.64■□□□□ 0.41
GMDS-208ENST00000530927 TEX19Q8NA77 164 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 TMEM52Q8NDY8 209 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 TBC1D20Q96BZ9 403 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 CCDC77Q9BR77 488 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 MS4A8Q9BY19 250 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 MRPL46Q9H2W6 279 aaKnown RBP17.64■□□□□ 0.41
GMDS-208ENST00000530927 ACTR8Q9H981 624 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 FETUBQ9UGM5 382 aa17.64■□□□□ 0.41
GMDS-208ENST00000530927 SPTA1P02549 2419 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 URADA6NGE7 173 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 SMIM24O75264 130 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 HNRNPFP52597 415 aaKnown RBP17.63■□□□□ 0.41
GMDS-208ENST00000530927 PCDH1Q08174 1060 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 KLRB1Q12918 225 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 LAPTM5Q13571 262 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 ABRAXAS2Q15018 415 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 CPSF6Q16630 551 aaKnown RBP eCLIP17.63■□□□□ 0.41
GMDS-208ENST00000530927 VWA5B1Q5TIE3 1220 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 ABHD17CQ6PCB6 329 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 ZNF793Q6ZN11 406 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 OR2L5Q8NG80 312 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 MTERF1Q99551 399 aaKnown RBP17.63■□□□□ 0.41
GMDS-208ENST00000530927 WDR77Q9BQA1 342 aaPredicted RBP17.63■□□□□ 0.41
GMDS-208ENST00000530927 PITHD1Q9GZP4 211 aaPredicted RBP17.63■□□□□ 0.41
GMDS-208ENST00000530927 ZNF700Q9H0M5 742 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 OR51B5Q9H339 312 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 C12orf65Q9H3J6 166 aaKnown RBP17.63■□□□□ 0.41
GMDS-208ENST00000530927 ZNF451Q9Y4E5 1061 aa17.63■□□□□ 0.41
GMDS-208ENST00000530927 NUDT17P0C025 328 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 MAOAP21397 527 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 NEK2P51955 445 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 MLLT10P55197 1068 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 CDH13P55290 713 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 SOX8P57073 446 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 TLE1Q04724 770 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 HIST2H2ACQ16777 129 aaPredicted RBP17.62■□□□□ 0.41
GMDS-208ENST00000530927 HIST2H2AA3Q6FI13 130 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 SH2D5Q6ZV89 423 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 CPEB2Q7Z5Q1 589 aaKnown RBP17.62■□□□□ 0.41
GMDS-208ENST00000530927 FAM47BQ8NA70 645 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 HUS1BQ8NHY5 278 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 METTL21AQ8WXB1 218 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 FAR2Q96K12 515 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 OR1F2PQ96R84 312 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 CSF3RQ99062 836 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 SEMA4BQ9NPR2 832 aaPredicted RBP17.62■□□□□ 0.41
GMDS-208ENST00000530927 PRDM7Q9NQW5 492 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 EMCNQ9ULC0 261 aa17.62■□□□□ 0.41
GMDS-208ENST00000530927 TNPO3Q9Y5L0 923 aaKnown RBP17.62■□□□□ 0.41
GMDS-208ENST00000530927 RELNP78509 3460 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 A0A1W2PQ72 361 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 STX16-NPEPL1H3BU86 382 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 STX16O14662 325 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 ETHE1O95571 254 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 RPS17P08708 135 aaKnown RBP17.61■□□□□ 0.41
GMDS-208ENST00000530927 PRR35P0CG20 571 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 ITGAMP11215 1152 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 GSTM2P28161 218 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 ARL1P40616 181 aaPredicted RBP17.61■□□□□ 0.41
GMDS-208ENST00000530927 RPS13P62277 151 aaKnown RBP17.61■□□□□ 0.41
GMDS-208ENST00000530927 TRAF3Q13114 568 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 NSDHLQ15738 373 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 TRIM40Q6P9F5 258 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 ATG14Q6ZNE5 492 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 LINC00696Q6ZRV3 163 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 SIRT6Q8N6T7 355 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 BRIX1Q8TDN6 353 aaKnown RBP17.61■□□□□ 0.41
GMDS-208ENST00000530927 PSMF1Q92530 271 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 MTFMTQ96DP5 389 aaKnown RBP17.61■□□□□ 0.41
GMDS-208ENST00000530927 IMMP1LQ96LU5 166 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 LHPPQ9H008 270 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 PPCSQ9HAB8 311 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 DMRT3Q9NQL9 472 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 NECTIN3Q9NQS3 549 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 TENM4Q6N022 2769 aa17.61■□□□□ 0.41
GMDS-208ENST00000530927 FASNP49327 2511 aaKnown RBP17.61■□□□□ 0.41
GMDS-208ENST00000530927 MYOCOSA0A1B0GUC4 107 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 TGFBR3LH3BV60 316 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 DLX3O60479 287 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 RNH1P13489 461 aaKnown RBP17.6■□□□□ 0.41
GMDS-208ENST00000530927 CASRP41180 1078 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 ST13P50502 369 aaKnown RBP17.6■□□□□ 0.41
GMDS-208ENST00000530927 ZRSR2Q15696 482 aaKnown RBP17.6■□□□□ 0.41
GMDS-208ENST00000530927 PRR30Q53SZ7 412 aaPredicted RBP17.6■□□□□ 0.41
GMDS-208ENST00000530927 SFT2D3Q587I9 215 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 LIPJQ5W064 366 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 B3GNTL1Q67FW5 361 aaPredicted RBP17.6■□□□□ 0.41
GMDS-208ENST00000530927 Q8NA96 180 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 ZNF483Q8TF39 744 aaPredicted RBP17.6■□□□□ 0.41
GMDS-208ENST00000530927 ATP6V1E2Q96A05 226 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 ZBTB9Q96C00 473 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 SEC16BQ96JE7 1060 aa17.6■□□□□ 0.41
GMDS-208ENST00000530927 TMEM237Q96Q45 408 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms