RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SLCO4C1Q6ZQN7 724 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 CAPN12Q6ZSI9 719 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 PYROXD1Q8WU10 500 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 CCT6BQ92526 530 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 ANP32BQ92688 251 aaKnown RBP19.57■□□□□ 0.72
SMPD1-204ENST00000530395 TMEM125Q96AQ2 219 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 RHBDF1Q96CC6 855 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 SEC16BQ96JE7 1060 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 DEFB126Q9BYW3 111 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 DERL2Q9GZP9 239 aa19.57■□□□□ 0.72
SMPD1-204ENST00000530395 CNOT10Q9H9A5 744 aaKnown RBP19.57■□□□□ 0.72
SMPD1-204ENST00000530395 NCF1BA6NI72 391 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-204ENST00000530395 NCF1CA8MVU1 366 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-204ENST00000530395 NPIPA5E9PKD4 350 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 NCF1P14598 390 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-204ENST00000530395 GDF5P43026 501 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 CBLBQ13191 982 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 TGFBIQ15582 683 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 MAPKAPK3Q16644 382 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-204ENST00000530395 ADAMTS18Q8TE60 1221 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 MCMBPQ9BTE3 642 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 NPLQ9BXD5 320 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-204ENST00000530395 PITHD1Q9GZP4 211 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-204ENST00000530395 TSPAN10Q9H1Z9 355 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-204ENST00000530395 NECTIN3Q9NQS3 549 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 WWOXQ9NZC7 414 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 GPRC5BQ9NZH0 403 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 NPIPA1Q9UND3 350 aa19.56■□□□□ 0.72
SMPD1-204ENST00000530395 A8MUA0 341 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 C4orf51C9J302 202 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 ERI3O43414 337 aaKnown RBP19.55■□□□□ 0.72
SMPD1-204ENST00000530395 NME2P1O60361 137 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 NME2P22392 152 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 MLF1P58340 268 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 TERF2Q15554 542 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 C18orf21Q32NC0 220 aaPredicted RBP19.55■□□□□ 0.72
SMPD1-204ENST00000530395 BNC2Q6ZN30 1099 aaPredicted RBP19.55■□□□□ 0.72
SMPD1-204ENST00000530395 NFAM1Q8NET5 270 aaPredicted RBP19.55■□□□□ 0.72
SMPD1-204ENST00000530395 AICDAQ9GZX7 198 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 NT5DC2Q9H857 520 aa19.55■□□□□ 0.72
SMPD1-204ENST00000530395 MRPS33Q9Y291 106 aaKnown RBP19.55■□□□□ 0.72
SMPD1-204ENST00000530395 LRIT2A6NDA9 550 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 ANKDD1BA6NHY2 528 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 CLDN4O14493 209 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 CLGNO14967 610 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 B3GALT2O43825 422 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 CLEC3AO75596 197 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 ZNF24P17028 368 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 TRHRP34981 398 aaPredicted RBP19.54■□□□□ 0.72
SMPD1-204ENST00000530395 HLCSP50747 726 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 CLCN2P51788 898 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 SMSP52788 366 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 ATP6V0D1P61421 351 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 C3AR1Q16581 482 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 CDKL4Q5MAI5 379 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 ZNF468Q5VIY5 522 aaPredicted RBP19.54■□□□□ 0.72
SMPD1-204ENST00000530395 GPSM1Q86YR5 675 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 SPPL2CQ8IUH8 684 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 B3GNT7Q8NFL0 401 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 MS4A6EQ96DS6 147 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 PDLIM2Q96JY6 352 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 UNKQ9C0B0 810 aaKnown RBP19.54■□□□□ 0.72
SMPD1-204ENST00000530395 EHD1Q9H4M9 534 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 TRIM45Q9H8W5 580 aaPredicted RBP19.54■□□□□ 0.72
SMPD1-204ENST00000530395 SAYSD1Q9NPB0 183 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 CHST11Q9NPF2 352 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 PRTFDC1Q9NRG1 225 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 SMYD2Q9NRG4 433 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 DNAJC11Q9NVH1 559 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 WHRNQ9P202 907 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 TINAGQ9UJW2 476 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 MTO1Q9Y2Z2 717 aaKnown RBP19.54■□□□□ 0.72
SMPD1-204ENST00000530395 GTF3C1Q12789 2109 aa19.54■□□□□ 0.72
SMPD1-204ENST00000530395 NCOA6Q14686 2063 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-204ENST00000530395 A0A0G2JN53 185 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 TRBV11-1A0A0K0K1C0 115 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 SYNDIG1LA6NDD5 238 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 FAM187AA6NFU0 413 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 EIF3HO15372 352 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMPD1-204ENST00000530395 WISP2O76076 250 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 MYO1DO94832 1006 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 CCDC166P0CW27 439 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 ABOP16442 354 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 STMN1P16949 149 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 TNFRSF8P28908 595 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 SSTR1P30872 391 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 HNRNPH1P31943 449 aaKnown RBP19.53■□□□□ 0.72
SMPD1-204ENST00000530395 HSD17B7P56937 341 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 RAB38P57729 211 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 SULT1C3Q6IMI6 304 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 TRIM40Q6P9F5 258 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 XKRXQ6PP77 449 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 Q6ZPB1 254 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-204ENST00000530395 MAATS1Q7Z4T9 603 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 SIAH3Q8IW03 269 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 ARMC10Q8N2F6 343 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 GHDCQ8N2G8 530 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 SNX31Q8N9S9 440 aa19.53■□□□□ 0.72
SMPD1-204ENST00000530395 POGLUT1Q8NBL1 392 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms