RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 AP2S1P53680 142 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 ARPP19P56211 112 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 GAB1Q13480 694 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 PTCHD3Q3KNS1 767 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 CYP27C1Q4G0S4 372 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 CPTPQ5TA50 214 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 NCEH1Q6PIU2 408 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 LINGO4Q6UY18 593 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 AMIGO1Q86WK6 493 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 L3MBTL4Q8NA19 623 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 NLGN4YQ8NFZ3 816 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 OR4M1Q8NGD0 313 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 BHMTQ93088 406 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 TMEM80Q96HE8 168 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 C1orf226A1L170 272 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 GAPDHSO14556 408 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 GADD45GO95257 159 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 CBLP22681 906 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 ACRV1P26436 265 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 DGKEP52429 567 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 CASP9P55211 416 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 C1DQ13901 141 aaKnown RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 LIPKQ5VXJ0 399 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 FRMPD2BQ6IN97 320 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 KLHL17Q6TDP4 642 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 MACC1Q6ZN28 852 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 CLDN22Q8N7P3 220 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 C19orf18Q8NEA5 215 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 SKA2Q8WVK7 121 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 MSLNLQ96KJ4 702 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 PIP5K1AQ99755 562 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 GTPBP2Q9BX10 602 aaKnown RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 TRIM45Q9H8W5 580 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-214ENST00000528165 C11orf16Q9NQ32 467 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 THSD1Q9NS62 852 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 TMEM39AQ9NV64 488 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 MAT2BQ9NZL9 334 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 SH3BP4Q9P0V3 963 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 FTSJ1Q9UET6 329 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 CHD5Q8TDI0 1954 aa14.07□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 SHOXO15266 292 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 TPST2O60704 377 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 LGI1O95970 557 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 GANABQ14697 944 aaKnown RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 CDONQ4KMG0 1287 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 CDKL4Q5MAI5 379 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 MEDAGQ5VYS4 303 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 TRIQKQ629K1 86 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 UBE2R2Q712K3 238 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 NPAS3Q8IXF0 933 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 ADGRG2Q8IZP9 1017 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 KIAA1143Q96AT1 154 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 FCRL1Q96LA6 429 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 AP5M1Q9H0R1 490 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 PRM3Q9NNZ6 103 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 ACER3Q9NUN7 267 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 KCTD5Q9NXV2 234 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 BTNL2Q9UIR0 455 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 PLXNA4Q9HCM2 1894 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 FADS2P1A8MWK0 482 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 H3BNC9 293 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 PLD2O14939 933 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 SCAMP2O15127 329 aaKnown RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 ZNF623O75123 536 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 CLDN11O75508 207 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 HIST1H2AGP0C0S8 130 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 HIST1H2ADP20671 130 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 GJA5P36382 358 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 TUFMP49411 452 aaKnown RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 ACSM2AQ08AH3 577 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 ACSM2BQ68CK6 577 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 MZT2BQ6NZ67 158 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 HSDL2Q6YN16 418 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 PHC2Q8IXK0 858 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 TAGAPQ8N103 731 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 OMA1Q96E52 524 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 HIST1H2AHQ96KK5 128 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 HIST1H2AJQ99878 128 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 H2AFJQ9BTM1 129 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 HTATIP2Q9BUP3 242 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 CRISPLD1Q9H336 500 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 RERGLQ9H628 205 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 SLC25A19Q9HC21 320 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 IL26Q9NPH9 171 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 TXNL4BQ9NX01 149 aaKnown RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 DNAJC27Q9NZQ0 273 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 VPS29Q9UBQ0 182 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 RUVBL1Q9Y265 456 aaKnown RBP14.06□□□□□ -0.16
CAPN1-214ENST00000528165 SLC22A14Q9Y267 594 aa14.06□□□□□ -0.16
CAPN1-214ENST00000528165 PRAMEF25A6NGN4 478 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 LEUTXA8MZ59 168 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 TLR4O00206 839 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 MYL12BO14950 172 aa14.05□□□□□ -0.16
CAPN1-214ENST00000528165 TEX28O15482 410 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms