RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 TMEM115Q12893 351 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TOP3AQ13472 1001 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TP53BP2Q13625 1128 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 E2F2Q14209 437 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 RGNQ15493 299 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 SMU1Q2TAY7 513 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 KIAA1614Q5VZ46 1190 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 EIF3MQ7L2H7 374 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TRMT11Q7Z4G4 463 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TCAIMQ8N3R3 496 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 SETD9Q8NE22 299 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 VN1R2Q8NFZ6 395 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 SUN5Q8TC36 379 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 KXD1Q9BQD3 176 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 PBX4Q9BYU1 374 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 ZBTB20Q9HC78 741 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 RUVBL1Q9Y265 456 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 ERGIC3Q9Y282 383 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 YBX2Q9Y2T7 364 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 PCYT1BQ9Y5K3 369 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 DMDP11532 3685 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 M0QX08 132 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TNFRSF11BO00300 401 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 RTCAO00442 366 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 KLK1P06870 262 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 CCDC159P0C7I6 412 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 DBTP11182 482 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 HPCAL1P37235 193 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 PRIM2P49643 509 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 CLK1P49759 484 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 ST13P50502 369 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 GABARAPL2P60520 117 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 POLR2LP62875 67 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 LRRC74AQ0VAA2 488 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 SLBPQ14493 270 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 SHHQ15465 462 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 PLEKHS1Q5SXH7 462 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 RAET1GQ6H3X3 334 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TANGO2Q6ICL3 276 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 CBLL1Q75N03 491 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 ANKRD13BQ86YJ7 626 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 PLD3Q8IV08 490 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 NPAS3Q8IXF0 933 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 ENTHD1Q8IYW4 607 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 SLC38A6Q8IZM9 456 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TRUB1Q8WWH5 349 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 TAMM41Q96BW9 452 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 CHFRQ96EP1 664 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 SLC6A17Q9H1V8 727 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 ACOT13Q9NPJ3 140 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 GPR83Q9NYM4 423 aa11.48□□□□□ -0.57
CHMP1B-201ENST00000526991 EPOPA6NHQ4 379 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 TRIM64BA6NI03 449 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 HEPACAM2A8MVW5 462 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 GCM2O75603 506 aaPredicted RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 CATP04040 527 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 EPHX1P07099 455 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 BMP4P12644 408 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 HNF4AP41235 474 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 BCAP31P51572 246 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 AP1S2P56377 157 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 TUBA1BP68363 451 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 KCNJ10P78508 379 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 RELAQ04206 551 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 MTAPQ13126 283 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 EIF2B5Q13144 721 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 RFX4Q33E94 735 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 GGTA1PQ4G0N0 100 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 CLIP4Q8N3C7 705 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 PSMA8Q8TAA3 256 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 NIPSNAP1Q9BPW8 284 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 RSPH9Q9H1X1 276 aaPredicted RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 ITM2CQ9NQX7 267 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 SACM1LQ9NTJ5 587 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 GPATCH2Q9NW75 528 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 RAB23Q9ULC3 237 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 EXO1Q9UQ84 846 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 A0A0G2JN53 185 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 H3BM21 787 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 MTRF1O75570 445 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 SERPINB7O75635 380 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 ITGAMP11215 1152 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 IDSP22304 550 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 S100A1P23297 94 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 VIPR1P32241 457 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 LIPAP38571 399 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 SEPHS1P49903 392 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 TBPL1P62380 186 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 C2orf80Q0P641 193 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 SZRD1Q7Z422 152 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 RNF130Q86XS8 419 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 ZNF480Q8WV37 535 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 APH1BQ8WW43 257 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 OTUB1Q96FW1 271 aaPredicted RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 SLC35A5Q9BS91 424 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 COPS4Q9BT78 406 aa11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 C6orf62Q9GZU0 229 aaPredicted RBP11.47□□□□□ -0.57
CHMP1B-201ENST00000526991 PALMDQ9NP74 551 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms