RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ATP5BP06576 529 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 STAG3L1P0CL83 205 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 SKILP12757 684 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 PGAM2P15259 253 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 CYP11B2P19099 503 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 CTNNA2P26232 953 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 ALDH3B1P43353 468 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 RPS27AP62979 156 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 CREB5Q02930 508 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 BAATQ14032 418 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 FASTKQ14296 549 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 NTRK2Q16620 822 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 PTGISQ16647 500 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 LRRC37A5PQ49AS3 106 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 TFDP3Q5H9I0 405 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 LIPJQ5W064 366 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 NAA16Q6N069 864 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 DET1Q7L5Y6 550 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 NUFIP2Q7Z417 695 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 SZRD1Q7Z422 152 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 TRMT11Q7Z4G4 463 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 TBC1D10CQ8IV04 446 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 RNF175Q8N4F7 328 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 SIPA1Q96FS4 1042 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 FNDC4Q9H6D8 234 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 CNOT10Q9H9A5 744 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 SH3GLB2Q9NR46 395 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 GIMAP4Q9NUV9 329 aa1.59□□□□□ -2.15
ECHDC1-219ENST00000526299 TNRQ92752 1358 aa1.59□□□□□ -2.16
ECHDC1-219ENST00000526299 FRG2CA6NGY1 282 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 CCT8L1PA6NM43 557 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 ERVV-1B6SEH8 477 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNF861PO60384 105 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 ENTPD3O75355 529 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 IGLV1-47P01700 117 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 IGHG3P01860 377 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 DNTTP04053 509 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 GOT1P17174 413 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 HSD17B3P37058 310 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 TNFRSF4P43489 277 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 NDST1P52848 882 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 EIF5P55010 431 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 EVCP57679 992 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 DCAF7P61962 342 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 CXCL6P80162 114 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 LRRC63Q05C16 580 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 RBBP4Q09028 425 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 PTPRCAPQ14761 206 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 LACTB2Q53H82 288 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 HSP90AB4PQ58FF6 505 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 ARMCX4Q5H9R4 360 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 FUT10Q6P4F1 479 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 EXOC8Q8IYI6 725 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 CEND1Q8N111 149 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 PRSS35Q8N3Z0 413 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNRF1Q8ND25 227 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 GANCQ8TET4 914 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 TEKT4Q8WW24 435 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 PYCR2Q96C36 320 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 FAF2Q96CS3 445 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 CCT8L2Q96SF2 557 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 PCDHB18PQ96TA0 734 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNF184Q99676 751 aaPredicted RBP1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 ANKZF1Q9H8Y5 726 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 EXOC1Q9NV70 894 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 SATB2Q9UPW6 733 aa1.58□□□□□ -2.16
ECHDC1-219ENST00000526299 NACAE9PAV3 2078 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 A0A1W2PQ67 120 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 A8MV72 311 aaPredicted RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 HMGB1P1B2RPK0 211 aaPredicted RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 CLDN4O14493 209 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 DOK2O60496 412 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 ANGPTL1O95841 491 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 MYL6BP14649 208 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 PCGF2P35227 344 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 SLC1A6P48664 564 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 UBASH3AP57075 661 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 PAX2Q02962 417 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 EBI3Q14213 229 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 ALFQ53S48 1182 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 FAAH2Q6GMR7 532 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 ANKRD33Q7Z3H0 272 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 PRUNE1Q86TP1 453 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 SMC5Q8IY18 1101 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNF781Q8N8C0 355 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 BEST4Q8NFU0 473 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 TBCKQ8TEA7 893 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 PRPF31Q8WWY3 499 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 RBM18Q96H35 190 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 PINK1Q9BXM7 581 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 SNX25Q9H3E2 840 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 PIH1D3Q9NQM4 214 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 DBF4Q9UBU7 674 aaPredicted RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 RAB26Q9ULW5 256 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 PPIEQ9UNP9 301 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 NEU3Q9UQ49 428 aa1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 CFAP65Q6ZU64 1925 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 ZNFX1Q9P2E3 1918 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-219ENST00000526299 KIR2DL5BA0A0G2JN68 375 aa1.56□□□□□ -2.16
ECHDC1-219ENST00000526299 KIR2DL5BA0A0G2JPC4 375 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms