RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CDC26Q8NHZ8 85 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 PROKR1Q8TCW9 393 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 NUDT8Q8WV74 236 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 EXTL1Q92935 676 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 TSLPQ969D9 159 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 GAL3ST3Q96A11 431 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 MIEF2Q96C03 454 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CCDC126Q96EE4 140 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 THAP11Q96EK4 314 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 THOC1Q96FV9 657 aaKnown RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CMTM7Q96FZ5 175 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 APIPQ96GX9 242 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SMIM10Q96HG1 83 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 FAR2Q96K12 515 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 FRG2BQ96QU4 278 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF382Q96SR6 550 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CSF3RQ99062 836 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SPSB2Q99619 263 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SH3GL2Q99962 352 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 CRB3Q9BUF7 120 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SARGQ9BW04 601 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 C1QTNF3Q9BXJ4 246 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 EBPLQ9BY08 206 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ACPTQ9BZG2 426 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 DPH1Q9BZG8 443 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 TUBB1Q9H4B7 451 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 EHD1Q9H4M9 534 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 COPS7BQ9H9Q2 264 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 PRDM7Q9NQW5 492 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 PNPOQ9NVS9 261 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 NKIRAS1Q9NYS0 192 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 SENP1Q9P0U3 644 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 C5AR2Q9P296 337 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 DKK4Q9UBT3 224 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF282Q9UDV7 671 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 MARCOQ9UEW3 520 aaPredicted RBP4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 TRPS1Q9UHF7 1281 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ZDHHC2Q9UIJ5 367 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 MID2Q9UJV3 735 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 C3orf18Q9UK00 162 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 ACSL6Q9UKU0 697 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 TCFL5Q9UL49 500 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 MKL2Q9ULH7 1088 aa4.35□□□□□ -1.71
CHMP4A-202ENST00000524955 KIF26BQ2KJY2 2108 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 FREM2Q5SZK8 3169 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 A0A087WV48 116 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM8BA6NDV4 472 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 URADA6NGE7 173 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 VSTM2BA6NLU5 285 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 IDSB3KWA1 339 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 H0YIV9 168 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TGFBR3LH3BV60 316 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 K7EM74 188 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 K7ENP7 123 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TXNDC9O14530 226 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 AZIN1O14977 448 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PIP5K1BO14986 540 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TM9SF1O15321 606 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 B3GALT2O43825 422 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 LDB3O75112 727 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PEX11AO75192 247 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ULK1O75385 1050 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SEC24DO94855 1032 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ZWINTO95229 277 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 BMP10O95393 424 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 RECKO95980 971 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SERPINE1P05121 402 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 HEXBP07686 556 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM87AP0C7U9 286 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 C8orf89P0DMQ9 161 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 NR1D1P20393 614 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CPN2P22792 545 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PTX3P26022 381 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 BSGP35613 385 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC1A6P48664 564 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CCL11P51671 97 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 GYS2P54840 703 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 EMP2P54851 167 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 MTTPP55157 894 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 LIM2P55344 173 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PKNOX1P55347 436 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 HNRNPH2P55795 449 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TMPRSS3P57727 454 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ABCE1P61221 599 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PHEXP78562 749 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 MC1RQ01726 317 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 RELAQ04206 551 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PCDH1Q08174 1060 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 VAC14Q08AM6 782 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 GALNT1Q10472 559 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 BST1Q10588 318 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TBL3Q12788 808 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CDC20Q12834 499 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 DSG2Q14126 1118 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM53BQ14153 422 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 E2F2Q14209 437 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 MAP7Q14244 749 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 HERC3Q15034 1050 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PDCD2Q16342 344 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 IMPG1Q17R60 797 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms