RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PARP15Q460N3 678 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 LRRC73Q5JTD7 316 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 C9orf64Q5T6V5 341 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SEL1L2Q5TEA6 688 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 C22orf39Q6P5X5 142 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF852Q6ZMS4 543 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 NEK10Q6ZWH5 1172 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SRLQ86TD4 932 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 PRPF39Q86UA1 669 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TRIM74Q86UV6 250 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TRIM73Q86UV7 250 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ZSCAN30Q86W11 494 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF354CQ86Y25 554 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 CACUL1Q86Y37 369 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SLC44A2Q8IWA5 706 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 MAP7D3Q8IWC1 876 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SUGP1Q8IWZ8 645 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 KLHDC8BQ8IXV7 354 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 CCDC13Q8IYE1 715 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ZNF567Q8N184 647 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 STK40Q8N2I9 435 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TEX26Q8N6G2 289 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 UBL4BQ8N7F7 174 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 OR2A12Q8NGT7 310 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 OR6K2Q8NGY2 324 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SPATA22Q8NHS9 363 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ARRDC2Q8TBH0 407 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ACTRT1Q8TDG2 376 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TMEM255BQ8WV15 326 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 FAM131CQ96AQ9 280 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TADA1Q96BN2 335 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TRIM44Q96DX7 344 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 MSANTD3Q96H12 275 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TXNDC15Q96J42 360 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TSGA13Q96PP4 275 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 QKIQ96PU8 341 aaKnown RBP eCLIP2.89□□□□□ -1.952e-6■□□□□ 10.6
CSDE1-208ENST00000524652 IL12RB2Q99665 862 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 NAPGQ99747 312 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 MGME1Q9BQP7 344 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TMEM121Q9BTD3 319 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 AP1M1Q9BXS5 423 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 BRD8Q9H0E9 1235 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 GAREM1Q9H706 876 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 PRSS16Q9NQE7 514 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TMEM51Q9NW97 253 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 GEMIN8Q9NWZ8 242 aaKnown RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 UBA2Q9UBT2 640 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 TTC7AQ9ULT0 858 aaPredicted RBP2.89□□□□□ -1.95
CSDE1-208ENST00000524652 MMP17Q9ULZ9 603 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 RCE1Q9Y256 329 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 HS3ST2Q9Y278 367 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 SLCO1B1Q9Y6L6 691 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 STON1Q9Y6Q2 735 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 ITPR1Q14643 2758 aa2.89□□□□□ -1.95
CSDE1-208ENST00000524652 FAM186AA6NE01 2351 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 C2CD3Q4AC94 2353 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ASCC3Q8N3C0 2202 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CABIN1Q9Y6J0 2220 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 A0A096LPK6 155 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TCRBV21S2A2A0A5A6 115 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 BCLAF3A2AJT9 711 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CTAGE9A4FU28 777 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ZSCAN5CA6NGD5 496 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 KDM4EB2RXH2 506 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 H7C0C1 242 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PGRMC1O00264 195 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SYT5O00445 386 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MCF2LO15068 1137 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MID1O15344 667 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 KCNN4O15554 427 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 METTL18O95568 372 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MT-CYBP00156 380 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CGAP01215 116 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 JCHAINP01591 159 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CKMT1AP12532 417 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CCNB1P14635 433 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 GM2AP17900 193 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TCP1P17987 556 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 BCKDHBP21953 392 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 PSMB4P28070 264 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 AVPR2P30518 371 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 CASQ1P31415 396 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 DCTDP32321 178 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 COILP38432 576 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 GRIA1P42261 906 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SKIV2L2P42285 1042 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 DPP6P42658 865 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 GPR12P47775 334 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 ATP5OP48047 213 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 NR2C2P49116 596 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 TAS2R38P59533 333 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 EIF3EP60228 445 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 RPS14P62263 151 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 IFI35P80217 286 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SEMG2Q02383 582 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SULT2A1Q06520 285 aa2.88□□□□□ -1.95
CSDE1-208ENST00000524652 SRSF5Q13243 272 aaKnown RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 MSLNQ13421 630 aaPredicted RBP2.88□□□□□ -1.95
CSDE1-208ENST00000524652 XRCC4Q13426 336 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms