RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SLC6A12P48065 614 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 CYB561P49447 251 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 NAA30Q147X3 362 aaPredicted RBP17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 FGD2Q7Z6J4 655 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 KLHDC8AQ8IYD2 350 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 ARMC10Q8N2F6 343 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 TMEM52Q8NDY8 209 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 RHBDF1Q96CC6 855 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 CHST11Q9NPF2 352 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 SMYD2Q9NRG4 433 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 CTNNAL1Q9UBT7 734 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 CLDN16Q9Y5I7 305 aa17.56■□□□□ 0.4
PTP4A3-206ENST00000524028 TGFBR3LH3BV60 316 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 C19orf84I3L1E1 186 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 WISP3O95389 354 aaPredicted RBP17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 TBX6O95947 436 aaPredicted RBP17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 HNMTP50135 292 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 HLCSP50747 726 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 HNRNPFP52597 415 aaKnown RBP17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 SLBPQ14493 270 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 SPATA6LQ8N4H0 392 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 FAM98AQ8NCA5 519 aaKnown RBP17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 MS4A6EQ96DS6 147 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 PDLIM2Q96JY6 352 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 RUNDC3BQ96NL0 473 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 PHF12Q96QT6 1004 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 DEFB126Q9BYW3 111 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 GPAMQ9HCL2 828 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 ZNF223Q9UK11 482 aaPredicted RBP17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 ASB1Q9Y576 335 aa17.55■□□□□ 0.4
PTP4A3-206ENST00000524028 OTOGQ6ZRI0 2925 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 PDZD2O15018 2839 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 TRBV11-1A0A0K0K1C0 115 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 LRIT2A6NDA9 550 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 NCF1BA6NI72 391 aaPredicted RBP17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 NCF1CA8MVU1 366 aaPredicted RBP17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 TAPBPO15533 448 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 PRAMEF4O60810 478 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 MYO1DO94832 1006 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 NCF1P14598 390 aaPredicted RBP17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 ZNF24P17028 368 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 GNAZP19086 355 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 AGAP20933 346 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 PPP2R1BP30154 601 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 RPL21P46778 160 aaKnown RBP17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 PRAMEF9Q5VWM5 478 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 TMIGD1Q6UXZ0 262 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 FRA10AC1Q70Z53 315 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 VN1R5Q7Z5H4 357 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 DOLPP1Q86YN1 238 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 SCUBE1Q8IWY4 988 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 GHDCQ8N2G8 530 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 B3GNT7Q8NFL0 401 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 GAL3ST3Q96A11 431 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 QRFPRQ96P65 431 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 TMEM79Q9BSE2 394 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 RHOJQ9H4E5 214 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 RUBCNLQ9H714 662 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 CAB39LQ9H9S4 337 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 MTO1Q9Y2Z2 717 aaKnown RBP17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 SNX24Q9Y343 169 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 MMACHCQ9Y4U1 282 aa17.54■□□□□ 0.4
PTP4A3-206ENST00000524028 EFCAB8A8MWE9 144 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 ADAM10O14672 748 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 H2AFYO75367 372 aaKnown RBP17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 PTGER1P34995 402 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 PTGER4P35408 488 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 GPR143P51810 404 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 SMSP52788 366 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 STXBP1P61764 594 aaKnown RBP17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 GNG11P61952 73 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 MRPS25P82663 173 aaKnown RBP17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 CBLBQ13191 982 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 TGFBIQ15582 683 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 FBXO48Q5FWF7 155 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 ADNP2Q6IQ32 1131 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 C3P1Q6ZMU1 363 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 CAPN12Q6ZSI9 719 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 ADAMTSL2Q86TH1 951 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 SULF2Q8IWU5 870 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 ZBED8Q8IZ13 594 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 ARMC2Q8NEN0 867 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 AGAP11Q8TF27 550 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 CCT6BQ92526 530 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 VPS39Q96JC1 886 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 FAR2Q96K12 515 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 POPDC3Q9HBV1 291 aa17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 PNO1Q9NRX1 252 aaKnown RBP17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 ZNF490Q9ULM2 529 aaPredicted RBP17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 PPIEQ9UNP9 301 aaKnown RBP17.53■□□□□ 0.4
PTP4A3-206ENST00000524028 CXorf49A8MYA2 514 aaPredicted RBP17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 FCHO1O14526 889 aa17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 ERI3O43414 337 aaKnown RBP17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 PRKNO60260 465 aaPredicted RBP17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 COX6B1P14854 86 aa17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 ABOP16442 354 aa17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 RFC3P40938 356 aa17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 KIR3DL1P43629 444 aa17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 MEOX1P50221 254 aa17.52■□□□□ 0.4
PTP4A3-206ENST00000524028 CLCN2P51788 898 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms