RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 BOP1Q14137 746 aaKnown RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 PTPRCAPQ14761 206 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 PAFAH1B3Q15102 231 aaKnown RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 SYCP1Q15431 976 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 TPD52L1Q16890 204 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 SLC5A12Q1EHB4 618 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 ZNF658BQ4V348 819 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 BCL7AQ4VC05 210 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 CES4AQ5XG92 561 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 ATG9BQ674R7 924 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 FCRLBQ6BAA4 426 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 DRICH1Q6PGQ1 229 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 SARM1Q6SZW1 724 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 PAMR1Q6UXH9 720 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 Q6ZRM9 215 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 HOOK3Q86VS8 718 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 CCDC71Q8IV32 467 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 CFAP206Q8IYR0 622 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 MDS2Q8NDY4 140 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 OR5AR1Q8NGP9 310 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 SPATA22Q8NHS9 363 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 SUN3Q8TAQ9 357 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 HM13Q8TCT9 377 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 TADA1Q96BN2 335 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 IMP4Q96G21 291 aaKnown RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 TSGA13Q96PP4 275 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 SIGLEC12Q96PQ1 595 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 MNTQ99583 582 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 SYT11Q9BT88 431 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 CHRNA10Q9GZZ6 450 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 OR52A5Q9H2C5 316 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 TFB2MQ9H5Q4 396 aaKnown RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 CUTCQ9NTM9 273 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 TMEM140Q9NV12 185 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 ANKRD10Q9NXR5 420 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 EURLQ9NYK6 297 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 MOCS1Q9NZB8 636 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 COQ3Q9NZJ6 369 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 FAM30AQ9NZY2 134 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.97□□□□□ -1.45
VPS13B-211ENST00000522802 C3orf18Q9UK00 162 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 PLAGL1Q9UM63 463 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 PLCL2Q9UPR0 1127 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 RNF6Q9Y252 685 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 L3MBTL1Q9Y468 752 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 ATP6V1DQ9Y5K8 247 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 HEBP2Q9Y5Z4 205 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 HIVEP2P31629 2446 aa5.97□□□□□ -1.45
VPS13B-211ENST00000522802 PHF3Q92576 2039 aaKnown RBP5.96□□□□□ -1.45
VPS13B-211ENST00000522802 SONP18583 2426 aaKnown RBP5.96□□□□□ -1.45
VPS13B-211ENST00000522802 A0A1W2PQ72 361 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 ASPDHA6ND91 283 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 INAFM1C9JVW0 142 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 ASNA1O43681 348 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 NDST3O95803 873 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 TPOP07202 933 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 MSH3P20585 1137 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 FDXRP22570 491 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 DNASE1P24855 282 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 ACRV1P26436 265 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 PDHA2P29803 388 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 CHRNB4P30926 498 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 HMGCLP35914 325 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 PRLHRP49683 370 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 RAB28P51157 221 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 DLX5P56178 289 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 IFI35P80217 286 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-211ENST00000522802 SLC10A2Q12908 348 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-211ENST00000522802 DPYSL3Q14195 570 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 KRT81Q14533 505 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 DPCR1Q3MIW9 517 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 KRTCAP3Q53RY4 240 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 ABHD17BQ5VST6 288 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 NDUFAF7Q7L592 441 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 LRRC49Q8IUZ0 686 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 BEST3Q8N1M1 668 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 CIARTQ8N365 385 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-211ENST00000522802 LMNTD1Q8N9Z9 388 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 STT3BQ8TCJ2 826 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS13B-211ENST00000522802 MRGPRX4Q96LA9 322 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 LINC00615Q96LM1 132 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-211ENST00000522802 COG4Q9H9E3 785 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 HAUS2Q9NVX0 235 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 IL17CQ9P0M4 197 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 STOX2Q9P2F5 926 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-211ENST00000522802 SLC23A1Q9UHI7 598 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 SCN2AQ99250 2005 aa5.96□□□□□ -1.46
VPS13B-211ENST00000522802 ANK3Q12955 4377 aaKnown RBP5.95□□□□□ -1.46
VPS13B-211ENST00000522802 IDSB3KWA1 339 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 TTI1O43156 1089 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 KLK8O60259 260 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 PIM1P11309 404 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-211ENST00000522802 ZNF24P17028 368 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 HK1P19367 917 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 SHMT2P34897 504 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 GJC1P36383 396 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 GRIA3P42263 894 aa5.95□□□□□ -1.46
VPS13B-211ENST00000522802 CARSP49589 748 aaKnown RBP5.95□□□□□ -1.46
VPS13B-211ENST00000522802 MAN2A2P49641 1150 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms