RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 THAP3Q8WTV1 239 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 EXT2Q93063 718 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 ESAMQ96AP7 390 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 NPAS2Q99743 824 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 RHOXF2Q9BQY4 288 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 RNF32Q9H0A6 362 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 SMYD2Q9NRG4 433 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 PNO1Q9NRX1 252 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 LRFN1Q9P244 771 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 SUCOQ9UBS9 1254 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 NPIPA1Q9UND3 350 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 OARD1Q9Y530 152 aa9.61□□□□□ -0.87
CTNNA1-235ENST00000522730 TACC2O95359 2948 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 ABCA12Q86UK0 2595 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 ANKDD1BA6NHY2 528 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 TP73O15350 636 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 SP1P08047 785 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 CYC1P08574 325 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 ESRRAP11474 423 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 HNMTP50135 292 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 PLA2G16P53816 162 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 CASP6P55212 293 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 STXBP1P61764 594 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 SLC13A2Q13183 592 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 FRG1Q14331 258 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 SLBPQ14493 270 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 ZNF468Q5VIY5 522 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 NIPAL1Q6NVV3 410 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 TMIGD1Q6UXZ0 262 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 SLCO4C1Q6ZQN7 724 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 C3orf62Q6ZUJ4 267 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 GALNTL5Q7Z4T8 443 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 ADAMTSL2Q86TH1 951 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 CA13Q8N1Q1 262 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 HORMAD2Q8N7B1 307 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 BBOF1Q8ND07 529 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 CREB3L4Q8TEY5 395 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 CDKL2Q92772 493 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 RELTQ969Z4 430 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 RHBDF1Q96CC6 855 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 TSPAN17Q96FV3 270 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 ERP44Q9BS26 406 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 SARGQ9BW04 601 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 DEFB126Q9BYW3 111 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 SLC6A16Q9GZN6 736 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 RAB17Q9H0T7 212 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 RHOJQ9H4E5 214 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 NECTIN3Q9NQS3 549 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 PRDM9Q9NQV7 894 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 NSMCE4AQ9NXX6 385 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 WWOXQ9NZC7 414 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 CD274Q9NZQ7 290 aa9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 UTP11Q9Y3A2 253 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 V9GYY5 206 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-235ENST00000522730 C4orf51C9J302 202 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 E7ESA3 106 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 TAPBPO15533 448 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 ERI3O43414 337 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 SH3BGRLO75368 114 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 MYO1DO94832 1006 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 S100BP04271 92 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 SERPINA6P08185 405 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 SNRPB2P08579 225 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 TPP2P29144 1249 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 GMPRP36959 345 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 HSPA7P48741 367 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 PLTPP55058 493 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 CDKL1Q00532 357 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 POU4F1Q01851 419 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 GUCY2DQ02846 1103 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 RUNX2Q13950 521 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 OR4D1Q15615 310 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 ERCC6LQ2NKX8 1250 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 XKR6Q5GH73 641 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 SLC25A25Q6KCM7 469 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 RAPH1Q70E73 1250 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 CLNKQ7Z7G1 428 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 MRGPRGQ86SM5 289 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 KRT78Q8N1N4 520 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 PPM1NQ8N819 430 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 TMEM178AQ8NBL3 297 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 MDS2Q8NDY4 140 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 MYRIPQ8NFW9 859 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 ANKRD7Q92527 254 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 MRRFQ96E11 262 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 MAGED4Q96JG8 741 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 DERL2Q9GZP9 239 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 DNAJC11Q9NVH1 559 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 DMGDHQ9UI17 866 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 FBXW2Q9UKT8 454 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 CROCCQ5TZA2 2017 aa9.59□□□□□ -0.87
CTNNA1-235ENST00000522730 TRBV11-1A0A0K0K1C0 115 aa9.58□□□□□ -0.88
CTNNA1-235ENST00000522730 ESYT3A0FGR9 886 aa9.58□□□□□ -0.88
CTNNA1-235ENST00000522730 LRIT2A6NDA9 550 aa9.58□□□□□ -0.88
CTNNA1-235ENST00000522730 B3GALT2O43825 422 aa9.58□□□□□ -0.88
CTNNA1-235ENST00000522730 CCNT2O60583 730 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-235ENST00000522730 SLC19A2O60779 497 aa9.58□□□□□ -0.88
CTNNA1-235ENST00000522730 SLC25A12O75746 678 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms