RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 NUDT13Q86X67 352 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 OR8J2Q8NGG1 315 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 HCAR2Q8TDS4 363 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 RGMAQ96B86 450 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 RIPOR3Q96MK2 946 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 CACYBPQ9HB71 228 aaKnown RBP10.87□□□□□ -0.67
CLK4-206ENST00000520878 GIMAP4Q9NUV9 329 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 WDR37Q9Y2I8 494 aa10.87□□□□□ -0.67
CLK4-206ENST00000520878 A0A1W2PPW3 197 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 TSPAN11A1L157 253 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 SOBPA7XYQ1 873 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 H0Y8X5 98 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 PFDN1O60925 122 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 BUD31P41223 144 aaPredicted RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 RAPSNQ13702 412 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 GBX1Q14549 363 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 TEAD4Q15561 434 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 BCL7AQ4VC05 210 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 IFI44LQ53G44 452 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 LRIF1Q5T3J3 769 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 ANKRD54Q6NXT1 300 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 DCP2Q8IU60 420 aaKnown RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLK4-206ENST00000520878 RIMKLAQ8IXN7 391 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 FRMD1Q8N878 549 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 OR8K5Q8NH50 307 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 OTULINQ96BN8 352 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 C12orf43Q96C57 262 aaKnown RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 CAMK1GQ96NX5 476 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 NODALQ96S42 347 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 RERGLQ9H628 205 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 ASIC5Q9NY37 505 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 PTTG2Q9NZH5 202 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLK4-206ENST00000520878 DUSP12Q9UNI6 340 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 ENTPD4Q9Y227 616 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 A0A0J9YVX5 310 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 C17orf113A0A1B0GUU1 675 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 PRKRAO75569 313 aaKnown RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 PCSK6P29122 969 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 DRD3P35462 400 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 NUDT6P53370 316 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 DSTNP60981 165 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 RAB39AQ14964 217 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 RFX4Q33E94 735 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 TMEM52BQ4KMG9 183 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 RPS26P11Q5JNZ5 115 aaPredicted RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 C6orf141Q5SZD1 244 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 DEPDC1Q5TB30 811 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 KHDRBS2Q5VWX1 349 aaKnown RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 C16orf87Q6PH81 154 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 UNC5DQ6UXZ4 953 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 Q6ZPB1 254 aaPredicted RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 SETD7Q8WTS6 366 aaKnown RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 VOPP1Q96AW1 172 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 COL21A1Q96P44 957 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 OSBPL10Q9BXB5 764 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 SEC14L3Q9UDX4 400 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 ACSL5Q9ULC5 683 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 MAN2B2Q9Y2E5 1009 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 TPRKBQ9Y3C4 175 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 TRBC2A0A5B9 178 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 M0R3G1 203 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 CAPN5O15484 640 aaPredicted RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 SPINT1O43278 529 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 NME6O75414 186 aaPredicted RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 PPP2R1BP30154 601 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 NTSP30990 170 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 NCBP2P52298 156 aaKnown RBP eCLIP10.86□□□□□ -0.671e-8■□□□□ 11
CLK4-206ENST00000520878 KCTD21Q4G0X4 260 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 EIF3MQ7L2H7 374 aaKnown RBP10.86□□□□□ -0.67
CLK4-206ENST00000520878 OLIG3Q7RTU3 272 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 SERPINA11Q86U17 422 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 CCDC116Q8IYX3 515 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 DEFB119Q8N690 84 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 GIPC3Q8TF64 312 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 CCDC115Q96NT0 180 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 OR52A5Q9H2C5 316 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 SRMSQ9H3Y6 488 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 TM9SF3Q9HD45 589 aa10.86□□□□□ -0.67
CLK4-206ENST00000520878 POM121BA6NF01 834 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 C5orf67F2Z3F1 127 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 OR10H3O60404 316 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 VIPP01282 170 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 DDX5P17844 614 aaKnown RBP10.85□□□□□ -0.67
CLK4-206ENST00000520878 FPR1P21462 350 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 WNT3P56703 355 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 RAE1P78406 368 aaKnown RBP10.85□□□□□ -0.67
CLK4-206ENST00000520878 GRSF1Q12849 480 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLK4-206ENST00000520878 ZBED5Q49AG3 693 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 ZNF765Q7L2R6 523 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 UBE2FQ969M7 185 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 FAIM2Q9BWQ8 316 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 NAA50Q9GZZ1 169 aaKnown RBP10.85□□□□□ -0.67
CLK4-206ENST00000520878 RAD21L1Q9H4I0 556 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 EPHX3Q9H6B9 360 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 IL1RAPQ9NPH3 570 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 PCDHGB3Q9Y5G1 929 aa10.85□□□□□ -0.67
CLK4-206ENST00000520878 PIAS3Q9Y6X2 628 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms