RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 GPALPP1Q8IXQ4 340 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 OR4N4Q8N0Y3 316 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 CYP4Z2PQ8N1L4 340 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 CIARTQ8N365 385 aaPredicted RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 FBXW8Q8N3Y1 598 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 CSNK1A1LQ8N752 337 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 IPMKQ8NFU5 416 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 OR2L3Q8NG85 312 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 OR52N2Q8NGI0 321 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ELP5Q8TE02 316 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 TFB1MQ8WVM0 346 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 RAD51AP1Q96B01 352 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 NTNG2Q96CW9 530 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 DACH2Q96NX9 599 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 OR1F2PQ96R84 312 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SMC6Q96SB8 1091 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 TTC1Q99614 292 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 DNAJC7Q99615 494 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 FERMT1Q9BQL6 677 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 AMBRA1Q9C0C7 1298 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ATG10Q9H0Y0 220 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 CDCP1Q9H5V8 836 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 HAUS4Q9H6D7 363 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 L2HGDHQ9H9P8 463 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 PNPLA3Q9NST1 481 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 ABHD10Q9NUJ1 306 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 AIPL1Q9NZN9 384 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 TRHDEQ9UKU6 1024 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 PLAGL1Q9UM63 463 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 RUVBL1Q9Y265 456 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 AAR2Q9Y312 384 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 FAM215AQ9Y5M1 114 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 BZW2Q9Y6E2 419 aaKnown RBP4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SCN3AQ9NY46 2000 aa4.56□□□□□ -1.68
SDCBP-207ENST00000520168 SVEP1Q4LDE5 3571 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 IGHV3-20A0A0C4DH32 117 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 MEGF11A6BM72 1044 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 LRRC53A6NM62 1247 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF839A8K0R7 811 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 MAGEB17A8MXT2 336 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 FAM25EA8MYX2 175 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 H0YGG7 62 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 HCN1O60741 890 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 DNAJB6O75190 326 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 PROSCO94903 275 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 CCNDBP1O95273 360 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 CNOT4O95628 575 aaKnown RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 HRGP04196 525 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 TP53P04637 393 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 CYP1A2P05177 515 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 BMP5P22003 454 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 JAK1P23458 1154 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 CYLC1P35663 651 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 GJC1P36383 396 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 PPARGP37231 505 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ARHGAP25P42331 645 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 MAGEA8P43361 318 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 XCR1P46094 333 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 MLF1P58340 268 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SLC26A5P58743 744 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ARF3P61204 181 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 PPIAP62937 165 aaKnown RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SKP1P63208 163 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 KLHL30Q0D2K2 578 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 MESDQ14696 234 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SLMAPQ14BN4 828 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ABRAXAS2Q15018 415 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 TMED2Q15363 201 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SF3B4Q15427 424 aaKnown RBP eCLIP4.55□□□□□ -1.686e-7■■■■■ 30.8
SDCBP-207ENST00000520168 NSDHLQ15738 373 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 HKDC1Q2TB90 917 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SFT2D3Q587I9 215 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ITPRIPL1Q6GPH6 555 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 RTL6Q6ICC9 239 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 OGFOD2Q6N063 350 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 NIPAL1Q6NVV3 410 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF585AQ6P3V2 769 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 LRRC8BQ6P9F7 803 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SYT10Q6XYQ8 523 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 GK5Q6ZS86 529 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 KIAA0408Q6ZU52 694 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 TAS2R42Q7RTR8 314 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF571Q7Z3V5 609 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ZNF227Q86WZ6 799 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 HIPK1Q86Z02 1210 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 LIX1LQ8IVB5 337 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 MYO1HQ8N1T3 1032 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 TXLNBQ8N3L3 684 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 TMEM156Q8N614 296 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 CLDN19Q8N6F1 224 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 PLPP5Q8NEB5 264 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 OR2A1Q8NGT9 310 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 OR51Q1Q8NH59 317 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 GSDMBQ8TAX9 411 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 NAT14Q8WUY8 206 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 C17orf50Q8WW18 174 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SYN2Q92777 582 aaPredicted RBP4.55□□□□□ -1.68
SDCBP-207ENST00000520168 ISL2Q96A47 359 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 VMP1Q96GC9 406 aa4.55□□□□□ -1.68
SDCBP-207ENST00000520168 SPATA13Q96N96 652 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms