RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 C12orf65Q9H3J6 166 aaKnown RBP20.76■□□□□ 0.91
VEGFA-217ENST00000518538 MID2Q9UJV3 735 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 FBXL4Q9UKA2 621 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 PLLPQ9Y342 182 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 SCN3AQ9NY46 2000 aa20.76■□□□□ 0.91
VEGFA-217ENST00000518538 FAM208BQ5VWN6 2430 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 PPP6CO00743 305 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 MLYCDO95822 493 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 FHP07954 510 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 RNH1P13489 461 aaKnown RBP20.75■□□□□ 0.91
VEGFA-217ENST00000518538 CPA3P15088 417 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 ACPPP15309 386 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 TSPAN8P19075 237 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 EFNA3P52797 238 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 MTTPP55157 894 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 TUBB8Q3ZCM7 444 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 MINDY4Q4G0A6 757 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 C10orf62Q5T681 223 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-217ENST00000518538 DEPDC1Q5TB30 811 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 MFSD4BQ5TF39 518 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 KHDRBS2Q5VWX1 349 aaKnown RBP20.75■□□□□ 0.91
VEGFA-217ENST00000518538 LETMD1Q6P1Q0 360 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 RNF175Q8N4F7 328 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 CLEC1AQ8NC01 280 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 OR11G2Q8NGC1 345 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 ZIM3Q96PE6 472 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 SERINC2Q96SA4 455 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 SMC6Q96SB8 1091 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 ZNF382Q96SR6 550 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 RBCK1Q9BYM8 510 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 ROGDIQ9GZN7 287 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-217ENST00000518538 PRDM7Q9NQW5 492 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 LANCL2Q9NS86 450 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 SENP1Q9P0U3 644 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 STK38LQ9Y2H1 464 aa20.75■□□□□ 0.91
VEGFA-217ENST00000518538 A0A1B0GTL3 188 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 A0A1W2PQ72 361 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 MAGEB17A8MXT2 336 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 MKRN2OSH3BPM6 223 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 FOXE1O00358 373 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-217ENST00000518538 RGS16O15492 202 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-217ENST00000518538 B3GALT2O43825 422 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 ALOX12BO75342 701 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 JAK1P23458 1154 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 CCL11P51671 97 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 NAA20P61599 178 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 RPS13P62277 151 aaKnown RBP20.74■□□□□ 0.91
VEGFA-217ENST00000518538 FRG2Q64ET8 278 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 TMEM205Q6UW68 189 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 UBE3DQ7Z6J8 389 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 CROCCP2Q86T23 111 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 CA13Q8N1Q1 262 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 METTL21AQ8WXB1 218 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 FRG2BQ96QU4 278 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 CENPKQ9BS16 269 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 TBCDQ9BTW9 1192 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 SEMA4CQ9C0C4 833 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 OR51B5Q9H339 312 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 COPS7BQ9H9Q2 264 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-217ENST00000518538 PSD3Q9NYI0 1048 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 TRPS1Q9UHF7 1281 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 PPT2Q9UMR5 302 aa20.74■□□□□ 0.91
VEGFA-217ENST00000518538 ZFYVE26Q68DK2 2539 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 CACNA1GO43497 2377 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 LOC102723996A0A087X1L8 192 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 PSMD12O00232 456 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-217ENST00000518538 CDC123O75794 336 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-217ENST00000518538 CEACAM4O75871 244 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 C8orf89P0DMQ9 161 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 PTX3P26022 381 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-217ENST00000518538 CERS1P27544 350 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 NEK2P51955 445 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 DNAJB13P59910 316 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 LCP2Q13094 533 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 IFT88Q13099 833 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 RUNX2Q13950 521 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 BEND6Q5SZJ8 279 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-217ENST00000518538 CEP85LQ5SZL2 805 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 TTC19Q6DKK2 380 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-217ENST00000518538 FAAH2Q6GMR7 532 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 LRIG3Q6UXM1 1119 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 MYRIPQ8NFW9 859 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 C9orf43Q8TAL5 461 aaPredicted RBP20.73■□□□□ 0.91
VEGFA-217ENST00000518538 C8orf44Q96CB5 159 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 ABHD17AQ96GS6 310 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 MESP1Q9BRJ9 268 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 OXSMQ9NWU1 459 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 ZNF225Q9UK10 706 aa20.73■□□□□ 0.91
VEGFA-217ENST00000518538 SH3BGRLO75368 114 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 OR4F21O95013 312 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 SCELO95171 688 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 HPP00738 406 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 TSFMP43897 325 aaKnown RBP20.72■□□□□ 0.91
VEGFA-217ENST00000518538 RAP1GDS1P52306 607 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 ARFIP1P53367 373 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 RHAGQ02094 409 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 AIMP2Q13155 320 aaKnown RBP20.72■□□□□ 0.91
VEGFA-217ENST00000518538 CUL3Q13618 768 aa20.72■□□□□ 0.91
VEGFA-217ENST00000518538 ZNF793Q6ZN11 406 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms