RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 SLC25A12O75746 678 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 PPP2R1BP30154 601 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 HNRNPH1P31943 449 aaKnown RBP16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 FRG1Q14331 258 aaKnown RBP16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 NAA30Q147X3 362 aaPredicted RBP16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 NIPAL1Q6NVV3 410 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 C3P1Q6ZMU1 363 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 SLCO4C1Q6ZQN7 724 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 FRA10AC1Q70Z53 315 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 SIAH3Q8IW03 269 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 RHBDF1Q96CC6 855 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 MAGED4Q96JG8 741 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 KRT12Q99456 494 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 LIN28AQ9H9Z2 209 aaKnown RBP16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 GPAMQ9HCL2 828 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 SAR1BQ9Y6B6 198 aa16.18■□□□□ 0.18
CTNNA1-206ENST00000517980 IGKV3D-11A0A0A0MRZ8 115 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 TAPBPO15533 448 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 GNAZP19086 355 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 GMPRP36959 345 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 RFC3P40938 356 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 CYB561P49447 251 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 HNMTP50135 292 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 HNRNPFP52597 415 aaKnown RBP16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 CDKL1Q00532 357 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 SLBPQ14493 270 aaKnown RBP eCLIP16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 ZNF630Q2M218 657 aaPredicted RBP16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 MTFR2Q6P444 385 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 BNC2Q6ZN30 1099 aaPredicted RBP16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 ZBED8Q8IZ13 594 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 FAM98AQ8NCA5 519 aaKnown RBP16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 TMEM52Q8NDY8 209 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 ARMC2Q8NEN0 867 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 ANKRD7Q92527 254 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 VPS39Q96JC1 886 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 PDLIM2Q96JY6 352 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 FAR2Q96K12 515 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 RUNDC3BQ96NL0 473 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 CLK4Q9HAZ1 481 aaKnown RBP16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 FBXW2Q9UKT8 454 aa16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 KLF2Q9Y5W3 355 aaPredicted RBP16.17■□□□□ 0.18
CTNNA1-206ENST00000517980 TRBV11-1A0A0K0K1C0 115 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 LRIT2A6NDA9 550 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 E7ESA3 106 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 TGFBR3LH3BV60 316 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 ERI3O43414 337 aaKnown RBP16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 NME2P1O60361 137 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 PRAMEF4O60810 478 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 MYO1DO94832 1006 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 NME2P22392 152 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 SSTR1P30872 391 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 PAFAH1B1P43034 410 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 SLC6A12P48065 614 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 HLCSP50747 726 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 PLA2G16P53816 162 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 STXBP1P61764 594 aaKnown RBP16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 TGFBIQ15582 683 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 PRAMEF9Q5VWM5 478 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 ADNP2Q6IQ32 1131 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 XKRXQ6PP77 449 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 TMIGD1Q6UXZ0 262 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 RPTNQ6XPR3 784 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 C16orf47Q6ZP98 133 aaPredicted RBP16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 Q6ZPB1 254 aaPredicted RBP16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 KLHDC8AQ8IYD2 350 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 LGI4Q8N135 537 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 MS4A6EQ96DS6 147 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 PHF12Q96QT6 1004 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 NAPGQ99747 312 aaPredicted RBP16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 MCMBPQ9BTE3 642 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 DPH5Q9H2P9 285 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 RHOJQ9H4E5 214 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 PRTFDC1Q9NRG1 225 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 ZNF490Q9ULM2 529 aaPredicted RBP16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 ZNF407Q9C0G0 2248 aa16.16■□□□□ 0.18
CTNNA1-206ENST00000517980 DNAJC13O75165 2243 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 C19orf84I3L1E1 186 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 PHGDHO43175 533 aaKnown RBP16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 MLYCDO95822 493 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 TBX6O95947 436 aaPredicted RBP16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 CCDC166P0CW27 439 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 ABOP16442 354 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 HSPA7P48741 367 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 SLC12A2P55011 1212 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 VN1R5Q7Z5H4 357 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 FGD2Q7Z6J4 655 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 CLNKQ7Z7G1 428 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 ADAMTSL2Q86TH1 951 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 DOLPP1Q86YN1 238 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 GPSM1Q86YR5 675 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 SULF2Q8IWU5 870 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 CHERPQ8IWX8 916 aaKnown RBP16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 FAM47BQ8NA70 645 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 APCDD1LQ8NCL9 501 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 B3GNT7Q8NFL0 401 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 AGAP11Q8TF27 550 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 PYROXD1Q8WU10 500 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 GAL3ST3Q96A11 431 aa16.15■□□□□ 0.18
CTNNA1-206ENST00000517980 TMEM125Q96AQ2 219 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms