RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 ECHDC3Q96DC8 303 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ITPKCQ96DU7 683 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 HMCESQ96FZ2 354 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PBKQ96KB5 322 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 DOCK7Q96N67 2140 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 OLFM3Q96PB7 478 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 NUDCD1Q96RS6 583 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 KRT12Q99456 494 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 NAP1L3Q99457 506 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 MGME1Q9BQP7 344 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 MESP1Q9BRJ9 268 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 OSBPL8Q9BZF1 889 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC39A8Q9C0K1 460 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC7A5P2Q9GIP4 190 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 POLR1EQ9GZS1 481 aaKnown RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ATP13A3Q9H7F0 1226 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 UCK1Q9HA47 277 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PRDM9Q9NQV7 894 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PLSCR4Q9NRQ2 329 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM212BQ9NTI7 297 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ZDHHC18Q9NUE0 388 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ABCF3Q9NUQ8 709 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ALKBH4Q9NXW9 302 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 DTLQ9NZJ0 730 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 IFT80Q9P2H3 777 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CPNE7Q9UBL6 633 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RNF14Q9UBS8 474 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 UBA2Q9UBT2 640 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 DNPEPQ9ULA0 475 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CDYLQ9Y232 598 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ATP8A1Q9Y2Q0 1164 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PPIL1Q9Y3C6 166 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SNX10Q9Y5X0 201 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 LOC105371242A0A075B767 164 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 A0A1B0GW55 424 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 HMX2A2RU54 273 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 LRP5LA4QPB2 252 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 RGSL1A5PLK6 1076 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CFAP73A6NFT4 308 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ERI2A8K979 691 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 A8MUI8 341 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 J3KR12 359 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 AP3B1O00203 1094 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 PSMD11O00231 422 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DFFAO00273 331 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TRAFD1O14545 582 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 BCKDKO14874 412 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 INSIG1O15503 277 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DDX3YO15523 660 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 PSMD3O43242 534 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ANGPTL7O43827 346 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 FZD6O60353 706 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CST8O60676 142 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 PEX11AO75192 247 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SKAP2O75563 359 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ITGA10O75578 1167 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ANXA9O76027 345 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CLPXO76031 633 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 STK10O94804 968 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TMCC1O94876 653 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 UBOX5O94941 541 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SCAF4O95104 1147 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 FTCDO95954 541 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SHBGP04278 402 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SERPINA7P05543 415 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ALOX5P09917 674 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DUX4L2P0CJ85 424 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DUX4L3P0CJ86 424 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DUX4L5P0CJ88 424 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DUX4L6P0CJ89 424 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 DUX4L7P0CJ90 424 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 GAAP10253 952 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 NQO1P15559 274 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ZNF23P17027 643 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 GNAZP19086 355 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CYP2A7P20853 494 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TEAD1P28347 426 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 IL2RGP31785 369 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 HPDP32754 393 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 BCL6P41182 706 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 NR4A2P43354 598 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MMP13P45452 471 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ZNF136P52737 540 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 WNT3P56703 355 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 MAGOHP61326 146 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 KCNJ2P63252 427 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 UBE2IP63279 158 aaKnown RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 GBE1Q04446 702 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 BCL2L1Q07817 233 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC10A7Q0GE19 358 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ELP6Q0PNE2 266 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SLC10A2Q12908 348 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TUBA3CQ13748 450 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 SLMAPQ14BN4 828 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 NOMO1Q15155 1222 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 ZKSCAN8Q15776 578 aaPredicted RBP2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 CCNG2Q16589 344 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 UGP2Q16851 508 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 TMEM52BQ4KMG9 183 aa2.9□□□□□ -1.95
SCARNA13-201ENST00000516672 IQCCQ4KMZ1 466 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms