RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 FBXO7Q9Y3I1 522 aa-1.33□□□□□ -2.62
RNU6-542P-201ENST00000516405 POMT1Q9Y6A1 747 aa-1.33□□□□□ -2.62
RNU6-542P-201ENST00000516405 SCINQ9Y6U3 715 aa-1.33□□□□□ -2.62
RNU6-542P-201ENST00000516405 CACNA1AO00555 2505 aa-1.33□□□□□ -2.62
RNU6-542P-201ENST00000516405 CACNA1CQ13936 2221 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 NSD2O96028 1365 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 COL1A1P02452 1464 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 RTCAO00442 366 aaKnown RBP-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 INPP4BO15327 924 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 FRAT2O75474 233 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 CDRT1O95170 752 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 TIMP1P01033 207 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 INSP01308 110 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 ATP1B1P05026 303 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 CCDC166P0CW27 439 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 HSPA8P11142 646 aaKnown RBP-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 UQCRC2P22695 453 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 AADACP22760 399 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 SLC6A6P31641 620 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 FCGR2BP31994 310 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 FCGR2CP31995 323 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 STT3AP46977 705 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 CRYBA2P53672 197 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 PNLIPRP2P54317 469 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 TRPC3Q13507 836 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 DPYSQ14117 519 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 TRIM29Q14134 588 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 FGFBP1Q14512 234 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 NAB2Q15742 525 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 CD226Q15762 336 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 KBTBD12Q3ZCT8 623 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 GPR33Q49SQ1 333 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 MSANTD1Q6ZTZ1 278 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 TPRG1Q6ZUI0 275 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 NUP54Q7Z3B4 507 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 NUFIP2Q7Z417 695 aaKnown RBP-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 GPR65Q8IYL9 337 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 FAM71E2Q8N5Q1 922 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 ZNF671Q8TAW3 534 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 ETNPPLQ8TBG4 499 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 DCUN1D4Q92564 292 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 ZNF566Q969W8 418 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 NXPE2Q96DL1 559 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 TMEM101Q96IK0 257 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 RCHY1Q96PM5 261 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 RHOBTB2Q9BYZ6 727 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 PABPC3Q9H361 631 aaKnown RBP-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 EGLN3Q9H6Z9 239 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 MTMR10Q9NXD2 777 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 ITM2BQ9Y287 266 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 TP53TG5Q9Y2B4 290 aa-1.34□□□□□ -2.62
RNU6-542P-201ENST00000516405 MROH7-TTC4A0A0A0MT08 1334 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 TNRC6AQ8NDV7 1962 aaKnown RBP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 A0A0G2JN53 185 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM237AA0A1B0GTK4 181 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 BCLAF3A2AJT9 711 aaKnown RBP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 HYKKA2RU49 373 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 EFCAB7A8K855 629 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 MRPS12O15235 138 aaKnown RBP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 NPIPB7O75200 414 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 JRKO75564 520 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLC25A27O95847 323 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 HRGP04196 525 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 SBK2P0C263 348 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 RARGP13631 454 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 CYP11B1P15538 503 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 C4BPBP20851 252 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 CD1BP29016 333 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 G6PCP35575 357 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 ALDH3B1P43353 468 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 RBM5P52756 815 aaKnown RBP eCLIP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 CRISP3P54108 245 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 AP2B1P63010 937 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 NAA25Q14CX7 972 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 MEP1AQ16819 746 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 ODF4Q2M2E3 257 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 TMCO4Q5TGY1 634 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLC27A4Q6P1M0 643 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 RINLQ6ZS11 566 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 SLC24A5Q71RS6 500 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 MOB1BQ7L9L4 216 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 CCDC71Q8IV32 467 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 ARHGAP24Q8N264 748 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 MIR7-3HGQ8N6C7 128 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 MAGEB6Q8N7X4 407 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 C11orf65Q8NCR3 313 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 OR51G1Q8NGK1 321 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 OR5M9Q8NGP3 310 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 ZNF461Q8TAF7 563 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 GSDMBQ8TAX9 411 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 SH3KBP1Q96B97 665 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 CHMP4CQ96CF2 233 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM210BQ96KR6 192 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM81BQ96LP2 452 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 HARBI1Q96MB7 349 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 H2AFJQ9BTM1 129 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 NUP62CLQ9H1M0 184 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 MROH8Q9H579 483 aa-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 STN1Q9H668 368 aaKnown RBP-1.35□□□□□ -2.63
RNU6-542P-201ENST00000516405 FAM204AQ9H8W3 233 aa-1.35□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms