RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 KLF15Q9UIH9 416 aa14.74□□□□□ -0.05
THUMPD3-210ENST00000515662 ADAM29Q9UKF5 820 aa14.74□□□□□ -0.05
THUMPD3-210ENST00000515662 DUSP12Q9UNI6 340 aa14.74□□□□□ -0.05
THUMPD3-210ENST00000515662 A0A1B0GVG6 124 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 ISM1B1AKI9 464 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 UPK1AO00322 258 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 DEAF1O75398 565 aaPredicted RBP14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 OR6B1O95007 311 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 PGM3O95394 542 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 HOXB3P14651 431 aaPredicted RBP14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 DDCP20711 480 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 CHN2P52757 468 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 ROR2Q01974 943 aaKnown RBP14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 C16orf72Q14CZ0 275 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 RGNQ15493 299 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 LIN52Q52LA3 116 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 NHSL2Q5HYW2 709 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 FAM47BQ8NA70 645 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 HLA-CQ95604 372 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 SARGQ9BW04 601 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 DDX31Q9H8H2 851 aaKnown RBP14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 LRP4O75096 1905 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 RNF103-CHMP3A0A140T963 221 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 DLGAP1O14490 977 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 TMPRSS11DO60235 418 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 TNFP01375 233 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 CD6P30203 668 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 ILF3Q12906 894 aaKnown RBP eCLIP14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 TMEM35AQ53FP2 167 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 ZNF425Q6IV72 752 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 SATL1Q86VE3 508 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 EID3Q8N140 333 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 FRMD1Q8N878 549 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 TSTD1Q8NFU3 115 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 PYURFQ96I23 114 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 SRMSQ9H3Y6 488 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 UTS2RQ9UKP6 389 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 SNX7Q9UNH6 387 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 COLQQ9Y215 455 aaPredicted RBP14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 KLHL20Q9Y2M5 609 aa14.73□□□□□ -0.05
THUMPD3-210ENST00000515662 A0A1W2PRB8 838 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 BTN3A3O00478 584 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 TBX19O60806 448 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 NTRK1P04629 796 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 NUDT7P0C024 238 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 GSTM2P28161 218 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 AHRP35869 848 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 OR4C11Q6IEV9 310 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 CHERPQ8IWX8 916 aaKnown RBP14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 GPBAR1Q8TDU6 330 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 TEFMQ96QE5 360 aaKnown RBP14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 SH3GL3Q99963 347 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 SLC35A5Q9BS91 424 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 KLHL31Q9H511 634 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 TAS2R9Q9NYW1 312 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 AP1M2Q9Y6Q5 423 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 HEATR5BQ9P2D3 2071 aa14.72□□□□□ -0.05
THUMPD3-210ENST00000515662 PPM1DO15297 605 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 STATHP02808 62 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 GSTM5P46439 218 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 MVDP53602 400 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 PLA2G16P53816 162 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 HYAL2Q12891 473 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 EIF2B5Q13144 721 aaKnown RBP14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 FZD5Q13467 585 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 VEZF1Q14119 521 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 HEPACAMQ14CZ8 416 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 PRRT3Q5FWE3 981 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 PTCRAQ6ISU1 281 aaPredicted RBP14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 IYDQ6PHW0 289 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 NAGSQ8N159 534 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 TBC1D19Q8N5T2 526 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 TRIML2Q8N7C3 387 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 AMER3Q8N944 861 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 MACROD1Q9BQ69 325 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 C17orf62Q9BQA9 187 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 TWSG1Q9GZX9 223 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 TCEAL2Q9H3H9 227 aaPredicted RBP14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 GPR27Q9NS67 375 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 GPATCH2Q9NW75 528 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 SAMD4AQ9UPU9 718 aaKnown RBP14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 A0A0A6YYD5 115 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 A0A0G2JN53 185 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 EI24O14681 340 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 ZNF23P17027 643 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 HOXB6P17509 224 aaKnown RBP14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 KDELR2P33947 212 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 ADPRMQ3LIE5 342 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 LEXMQ3ZCV2 418 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 ST13P4Q8IZP2 240 aaPredicted RBP14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 MFSD9Q8NBP5 474 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 RLN3Q8WXF3 142 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 TMBIM1Q969X1 311 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 ABCG4Q9H172 646 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 SYNPO2LQ9H987 977 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 DNAJB9Q9UBS3 223 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 PCDHGA4Q9Y5G9 962 aa14.71□□□□□ -0.05
THUMPD3-210ENST00000515662 TRIOBPQ9H2D6 2365 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms