RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 NAV3Q8IVL0 2385 aa14.68□□□□□ -0.06
LMNA-223ENST00000515459 PABPN1LA6NDY0 278 aaKnown RBP14.67□□□□□ -0.06
LMNA-223ENST00000515459 URADA6NGE7 173 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 MYO1DO94832 1006 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 AHRP35869 848 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 SCTRP47872 440 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 RAB8AP61006 207 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 PPIAP62937 165 aaKnown RBP14.67□□□□□ -0.06
LMNA-223ENST00000515459 PPP2R2AP63151 447 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 PLGLB1Q02325 96 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 CSHL1Q14406 222 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 CATSPEREQ5SY80 951 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 ANKRD22Q5VYY1 191 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 MYRIPQ8NFW9 859 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 OR10Q1Q8NGQ4 319 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 OR56A3Q8NH54 315 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 VMP1Q96GC9 406 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 OR4K3Q96R72 315 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 NDNQ99608 321 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 RHBGQ9H310 441 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 XAB2Q9HCS7 855 aaKnown RBP14.67□□□□□ -0.06
LMNA-223ENST00000515459 HOMER3Q9NSC5 361 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 DEPPQ9NTK1 212 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 CCM2LQ9NUG4 571 aaPredicted RBP14.67□□□□□ -0.06
LMNA-223ENST00000515459 ARL15Q9NXU5 204 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 DNAJB12Q9NXW2 375 aaKnown RBP14.67□□□□□ -0.06
LMNA-223ENST00000515459 TAS2R13Q9NYV9 303 aa14.67□□□□□ -0.06
LMNA-223ENST00000515459 YARS2Q9Y2Z4 477 aaKnown RBP14.67□□□□□ -0.06
LMNA-223ENST00000515459 PRRC2AP48634 2157 aaKnown RBP14.67□□□□□ -0.06
LMNA-223ENST00000515459 DNAJC13O75165 2243 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 A8MVJ9 347 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 KLK2P20151 261 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 ACVR2AP27037 513 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 HNF4AP41235 474 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 ZFP36L2P47974 494 aaKnown RBP14.66□□□□□ -0.06
LMNA-223ENST00000515459 NR0B1P51843 470 aaKnown RBP14.66□□□□□ -0.06
LMNA-223ENST00000515459 TIAL1Q01085 375 aaKnown RBP eCLIP14.66□□□□□ -0.06
LMNA-223ENST00000515459 HSP90AA5PQ58FG0 334 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 PAQR3Q6TCH7 311 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 RGS9BPQ6ZS82 235 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 GPALPP1Q8IXQ4 340 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 TRPV3Q8NET8 790 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 SLC5A11Q8WWX8 675 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 PDLIM2Q96JY6 352 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 CCDC77Q9BR77 488 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 FAM167BQ9BTA0 163 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 SPNS1Q9H2V7 528 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 ZDHHC11Q9H8X9 412 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 PNO1Q9NRX1 252 aaKnown RBP14.66□□□□□ -0.06
LMNA-223ENST00000515459 PNPLA3Q9NST1 481 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 HPF1Q9NWY4 346 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 ZNF223Q9UK11 482 aaPredicted RBP14.66□□□□□ -0.06
LMNA-223ENST00000515459 PPIEQ9UNP9 301 aaKnown RBP14.66□□□□□ -0.06
LMNA-223ENST00000515459 MMACHCQ9Y4U1 282 aa14.66□□□□□ -0.06
LMNA-223ENST00000515459 OR14I1A6ND48 311 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 FIGNL2A6NMB9 653 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 FAM166BA8MTA8 275 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 GOLGA8MH3BSY2 632 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 BCKDKO14874 412 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 CTAG2O75638 210 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 FAM155BO75949 473 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 SMIM10L1P0DMW3 83 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 AP1S2P56377 157 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 HECTD2Q5U5R9 776 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 ZNF585AQ6P3V2 769 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 B3GNT6Q6ZMB0 384 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 SLC22A16Q86VW1 577 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 MMP21Q8N119 569 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 CA13Q8N1Q1 262 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 MCUQ8NE86 351 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 OR2M7Q8NG81 312 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 OR5M9Q8NGP3 310 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 CREB3L4Q8TEY5 395 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 ATL1Q8WXF7 558 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 ASB15Q8WXK1 588 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 NEIL2Q969S2 332 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 NCLNQ969V3 563 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 LINGO1Q96FE5 620 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 SMIM10Q96HG1 83 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 SERPINB12Q96P63 405 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 SMC6Q96SB8 1091 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 TTYH2Q9BSA4 534 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 POLDIP3Q9BY77 421 aaKnown RBP14.65□□□□□ -0.06
LMNA-223ENST00000515459 TRIM54Q9BYV2 358 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 TTTY12Q9BZ98 90 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 KLHL31Q9H511 634 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 IARS2Q9NSE4 1012 aaKnown RBP14.65□□□□□ -0.06
LMNA-223ENST00000515459 L3MBTL1Q9Y468 752 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 MAD1L1Q9Y6D9 718 aa14.65□□□□□ -0.06
LMNA-223ENST00000515459 ZNF469Q96JG9 3925 aaPredicted RBP14.64□□□□□ -0.07
LMNA-223ENST00000515459 PINLYPA6NC86 204 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 OR2J2O76002 312 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 ZFAND5O76080 213 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 KRT14P02533 472 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 GPR143P51810 404 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 CEBPEQ15744 281 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 NDUFAF5Q5TEU4 345 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 IL20RBQ6UXL0 311 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 ANKRD53Q8N9V6 530 aa14.64□□□□□ -0.07
LMNA-223ENST00000515459 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms