RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 C17orf62Q9BQA9 187 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 DPH2Q9BQC3 489 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-214ENST00000513989 NUF2Q9BZD4 464 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 EPN3Q9H201 632 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 MEAF6Q9HAF1 191 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 LRTM1Q9HBL6 345 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 TNFRSF12AQ9NP84 129 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 CUTCQ9NTM9 273 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 C1orf109Q9NX04 203 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 ADAM29Q9UKF5 820 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 SATB2Q9UPW6 733 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 EIF3LQ9Y262 564 aaKnown RBP9.65□□□□□ -0.86
NEDD9-214ENST00000513989 WBP11Q9Y2W2 641 aaKnown RBP9.65□□□□□ -0.86
NEDD9-214ENST00000513989 PCDHGA3Q9Y5H0 932 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 AK5Q9Y6K8 562 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 SPACA6W5XKT8 324 aa9.65□□□□□ -0.86
NEDD9-214ENST00000513989 MAST4O15021 2626 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 A0A1B0GX78 115 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 A0A1W2PNU3 283 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 H0YIG0 161 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 SAP18O00422 153 aaKnown RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 DSCR3O14972 297 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 NVLO15381 856 aaKnown RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 HCRTR1O43613 425 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 B3GALT2O43825 422 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 CPNE3O75131 537 aaKnown RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 PEX11AO75192 247 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 SH3BGRLO75368 114 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 SKAP2O75563 359 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 STATHP02808 62 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 NTRK1P04629 796 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF888P0CJ79 500 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 PRPH2P23942 346 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 CD82P27701 267 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 TLX1P31314 330 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 SSR2P43308 183 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 AQP5P55064 265 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 MTTPP55157 894 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 RAB8AP61006 207 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 GABREP78334 506 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 DCDP81605 110 aaKnown RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 HMGCS1Q01581 520 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ABHD18Q0P651 414 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 SLC9A5Q14940 896 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 RPS6KA2Q15349 733 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ADPRMQ3LIE5 342 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 TBC1D25Q3MII6 688 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 CCNYL2Q5T2Q4 361 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 RHBDD2Q6NTF9 364 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 PWWP2BQ6NUJ5 590 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ABHD17CQ6PCB6 329 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 EPGNQ6UW88 154 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ATG14Q6ZNE5 492 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 VN1R5Q7Z5H4 357 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 METTL4Q8N3J2 472 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 CEP70Q8NHQ1 597 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ACTRT2Q8TDY3 377 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 UTP15Q8TED0 518 aaKnown RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 CHTF18Q8WVB6 975 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 COL26A1Q96A83 441 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 PPP1R36Q96LQ0 422 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 RILPQ96NA2 401 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 SLC46A1Q96NT5 459 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF317Q96PQ6 595 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 SERINC2Q96SA4 455 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 HBEGFQ99075 208 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 NPLQ9BXD5 320 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ACPTQ9BZG2 426 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 ULBP3Q9BZM4 244 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 KLHL31Q9H511 634 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 AKTIPQ9H8T0 292 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 NPHS2Q9NP85 383 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 MRGBPQ9NV56 204 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 FGFR1OP2Q9NVK5 253 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 MS4A12Q9NXJ0 267 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 DCTN4Q9UJW0 460 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 PADI1Q9ULC6 663 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 TRIM33Q9UPN9 1127 aa9.64□□□□□ -0.87
NEDD9-214ENST00000513989 A0A0G2JND7 137 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 GNG14A0A1W2PPG7 69 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 NPIPB8E9PQR5 432 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 PSMD12O00232 456 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 P2RX6O15547 441 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 NSA2O95478 260 aaKnown RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 KLK1P06870 262 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 SMIM10L1P0DMW3 83 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 DDX5P17844 614 aaKnown RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 LBPP18428 481 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 ITIH1P19827 911 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 IL10P22301 178 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 HIST1H1TP22492 207 aaPredicted RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 ATP5A1P25705 553 aaKnown RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 GSTM5P46439 218 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 HTR6P50406 440 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 ARFIP2P53365 341 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 TRA2BP62995 288 aaKnown RBP9.63□□□□□ -0.87
NEDD9-214ENST00000513989 TLE3Q04726 772 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 EMX2Q04743 252 aa9.63□□□□□ -0.87
NEDD9-214ENST00000513989 HYAL2Q12891 473 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms