RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 HEPACAMQ14CZ8 416 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TCEA2Q15560 299 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 KIAA1614Q5VZ46 1190 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.25□□□□□ -0.13
VCAN-211ENST00000513984 MMP21Q8N119 569 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TBC1D19Q8N5T2 526 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 NATD1Q8N6N6 113 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 OR4E2Q8NGC2 313 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 GPBAR1Q8TDU6 330 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 CEP192Q8TEP8 1941 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 JPH3Q8WXH2 748 aaPredicted RBP14.25□□□□□ -0.13
VCAN-211ENST00000513984 PYURFQ96I23 114 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 VPS50Q96JG6 964 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 CNBD2Q96M20 576 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TRIM4Q9C037 500 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 LMAN1LQ9HAT1 526 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 C2orf42Q9NWW7 574 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TAS2R9Q9NYW1 312 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 CA14Q9ULX7 337 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 SNX7Q9UNH6 387 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 A0A0A6YYD5 115 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 A0A1W2PRB8 838 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 ISM1B1AKI9 464 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TMPRSS11DO60235 418 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TNFP01375 233 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 DDX5P17844 614 aaKnown RBP14.25□□□□□ -0.13
VCAN-211ENST00000513984 HYAL2Q12891 473 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 GAS6Q14393 721 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 OR4C11Q6IEV9 310 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 CARM1Q86X55 608 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TSTD1Q8NFU3 115 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 HLA-CQ95604 372 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 SLC22A18Q96BI1 424 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 DPH2Q9BQC3 489 aaPredicted RBP14.25□□□□□ -0.13
VCAN-211ENST00000513984 SLC35A5Q9BS91 424 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 GPR174Q9BXC1 333 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 SRMSQ9H3Y6 488 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 GPATCH2Q9NW75 528 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 PDP2Q9P2J9 529 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 DNAJB9Q9UBS3 223 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 PCDHGA4Q9Y5G9 962 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 SPTY2D1-AS1A0A0U1RR47 76 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 BTN3A3O00478 584 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 SOX1O00570 391 aaPredicted RBP14.24□□□□□ -0.13
VCAN-211ENST00000513984 EI24O14681 340 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 ZNF23P17027 643 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 KDELR2P33947 212 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 PCGF2P35227 344 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 MAGEA2P43356 314 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 LEXMQ3ZCV2 418 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.24□□□□□ -0.13
VCAN-211ENST00000513984 OR52E8Q6IFG1 317 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 PAQR7Q86WK9 346 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 CLEC4FQ8N1N0 589 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 MFSD9Q8NBP5 474 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 OR52N2Q8NGI0 321 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 FLVCR1-AS1Q8TAF5 88 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 ZFPM2Q8WW38 1151 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 TFAP2CQ92754 450 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 TMBIM1Q969X1 311 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 TEFMQ96QE5 360 aaKnown RBP14.24□□□□□ -0.13
VCAN-211ENST00000513984 ANKRD60Q9BZ19 345 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 UTS2RQ9UKP6 389 aa14.24□□□□□ -0.13
VCAN-211ENST00000513984 A0A1W2PPC4 97 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 DPPA5A6NC42 116 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 ZNF217O75362 1048 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 CST1P01037 141 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 NTRK1P04629 796 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 SERPIND1P05546 499 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 HOXB3P14651 431 aaPredicted RBP14.23□□□□□ -0.13
VCAN-211ENST00000513984 FRKP42685 505 aaPredicted RBP14.23□□□□□ -0.13
VCAN-211ENST00000513984 SSR2P43308 183 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 EIF2B5Q13144 721 aaKnown RBP14.23□□□□□ -0.13
VCAN-211ENST00000513984 FADDQ13158 208 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 FZD5Q13467 585 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 GK3PQ14409 553 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 KIR2DS3Q14952 304 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 C16orf72Q14CZ0 275 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 LRRC23Q53EV4 343 aaPredicted RBP14.23□□□□□ -0.13
VCAN-211ENST00000513984 PRRT3Q5FWE3 981 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 IYDQ6PHW0 289 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 ZNF793Q6ZN11 406 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 ZCCHC7Q8N3Z6 543 aaKnown RBP14.23□□□□□ -0.13
VCAN-211ENST00000513984 MS4A6EQ96DS6 147 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 C17orf62Q9BQA9 187 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 ORAI3Q9BRQ5 295 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 GSDMCQ9BYG8 508 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 RPS6KA6Q9UK32 745 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 PCDHGB5Q9Y5G0 923 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 PCDHGA2Q9Y5H1 932 aa14.23□□□□□ -0.13
VCAN-211ENST00000513984 TNFRSF21O75509 655 aa14.22□□□□□ -0.13
VCAN-211ENST00000513984 SEMG1P04279 462 aa14.22□□□□□ -0.13
VCAN-211ENST00000513984 NUDT7P0C024 238 aa14.22□□□□□ -0.13
VCAN-211ENST00000513984 RPS9P46781 194 aaKnown RBP14.22□□□□□ -0.13
VCAN-211ENST00000513984 PLA2G16P53816 162 aa14.22□□□□□ -0.13
VCAN-211ENST00000513984 FZD2Q14332 565 aa14.22□□□□□ -0.13
VCAN-211ENST00000513984 TEAD4Q15561 434 aa14.22□□□□□ -0.13
VCAN-211ENST00000513984 PTCRAQ6ISU1 281 aaPredicted RBP14.22□□□□□ -0.13
VCAN-211ENST00000513984 TMEM214Q6NUQ4 689 aaKnown RBP14.22□□□□□ -0.13
VCAN-211ENST00000513984 CBLL1Q75N03 491 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms