RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 OOSP2Q86WS3 158 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CLYBLQ8N0X4 340 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 BBS5Q8N3I7 341 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 NANOGP1Q8N7R0 232 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 NRACQ8N912 160 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM156AQ8NDB6 213 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 OR1L3Q8NH93 324 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SVIPQ8NHG7 77 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SUN3Q8TAQ9 357 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 BRSK1Q8TDC3 778 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PIH1D2Q8WWB5 315 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CNDP1Q96KN2 507 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CFAP57Q96MR6 1250 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 LYSMD1Q96S90 227 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 C1orf43Q9BWL3 253 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 NAA15Q9BXJ9 866 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 TLR10Q9BXR5 811 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CHRNA10Q9GZZ6 450 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF700Q9H0M5 742 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PDCL3Q9H2J4 239 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 WDR54Q9H977 334 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 MRM3Q9HC36 420 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ACP6Q9NPH0 428 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 KCNJ16Q9NPI9 418 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM207AQ9NSI2 230 aaPredicted RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SEPT11Q9NVA2 429 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 RMND1Q9NWS8 449 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 IL17CQ9P0M4 197 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SH3BP4Q9P0V3 963 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 IFT80Q9P2H3 777 aaPredicted RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ATXN10Q9UBB4 475 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 RPL26L1Q9UNX3 145 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 MTMR6Q9Y217 621 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 HPSEQ9Y251 543 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PCYT1BQ9Y5K3 369 aaPredicted RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 INTS1Q8N201 2190 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 C17orf113A0A1B0GUU1 675 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 C2CD4BA6NLJ0 364 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 OR52A4PA6NMU1 304 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF785A8K8V0 405 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SOCS6O14544 535 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ARHGEF9O43307 516 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 USP1O94782 785 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 CDK14O94921 469 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 NXPH3O95157 252 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC25A14O95258 325 aaPredicted RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 LSM8O95777 96 aaKnown RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 LY6G6DO95868 133 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 IFNA2P01563 188 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 UMODP07911 640 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ICAM2P13598 275 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF8P17098 575 aaPredicted RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 MST1P26927 711 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PEX2P28328 305 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 NDUFS1P28331 727 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 USP8P40818 1118 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PRCPP42785 496 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 HCAR3P49019 387 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SPINT3P49223 89 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 CARSP49589 748 aaKnown RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF135P52742 658 aaPredicted RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 STC1P52823 247 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ARSFP54793 590 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC10A7Q0GE19 358 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ABRQ12979 859 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PRKAA1Q13131 559 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 INSCQ1MX18 579 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PTCHD3Q3KNS1 767 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TUBB8Q3ZCM7 444 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 CCDC14Q49A88 953 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 NKAIN1Q4KMZ8 207 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ANKRD20A8PQ5CZ79 823 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF658Q5TYW1 1059 aaPredicted RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM69BQ5VUD6 431 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TRNP1Q6NT89 227 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TLDC1Q6P9B6 456 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PODNL1Q6PEZ8 512 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 KIRREL2Q6UWL6 708 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 GSG1LQ6UXU4 331 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 CERS6Q6ZMG9 384 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 LINC00696Q6ZRV3 163 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PHLDB2Q86SQ0 1253 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TSPAN33Q86UF1 283 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TRIM74Q86UV6 250 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PAQR7Q86WK9 346 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 DOLPP1Q86YN1 238 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 GOT1L1Q8NHS2 421 aaPredicted RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 CCDC110Q8TBZ0 833 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 DTX3LQ8TDB6 740 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 RXFP2Q8WXD0 754 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM158Q8WZ71 300 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 PSMF1Q92530 271 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SNX21Q969T3 373 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 FKBP10Q96AY3 582 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 SDCCAG3Q96C92 435 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 APIPQ96GX9 242 aa3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 DHTKD1Q96HY7 919 aaPredicted RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 THOC3Q96J01 351 aaKnown RBP3.47□□□□□ -1.85
PDLIM5-218ENST00000513341 MAGED4Q96JG8 741 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms