RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 PTCHD1Q96NR3 888 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 OR1F2PQ96R84 312 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 LPAR4Q99677 370 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TUBB6Q9BUF5 446 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 CD244Q9BZW8 370 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 SLC6A16Q9GZN6 736 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 KCNK13Q9HB14 408 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 AGPAT4Q9NRZ5 378 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 IGSF5Q9NSI5 407 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 GPRC5BQ9NZH0 403 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 CPSF2Q9P2I0 782 aaKnown RBP6.13□□□□□ -1.43
KDM3B-208ENST00000512928 OPTCQ9UBM4 332 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 TEKT2Q9UIF3 430 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 PCM1Q15154 2024 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 CCDC88CQ9P219 2028 aa6.13□□□□□ -1.43
KDM3B-208ENST00000512928 UTP20O75691 2785 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 LOC102723996A0A087X1L8 192 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 A8MUA0 341 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 MAGEB17A8MXT2 336 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 C4orf51C9J302 202 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 FAM227AF5H4B4 570 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 SAP18O00422 153 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 RIPK2O43353 540 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 B3GALT2O43825 422 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 KERAO60938 352 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 KRT38O76015 456 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 C2P06681 752 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 SERPINA6P08185 405 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 NUDT17P0C025 328 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 RNH1P13489 461 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 EPB42P16452 691 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 IL10P22301 178 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 CERS1P27544 350 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 HNRNPH1P31943 449 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 GGT5P36269 586 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 MSH2P43246 934 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ST13P50502 369 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 TAS2R50P59544 299 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 BTG2P78543 158 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 RHAGQ02094 409 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 OC90Q02509 493 aaPredicted RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 TGM3Q08188 693 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 HYAL2Q12891 473 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 DLG1Q12959 904 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 SLC13A2Q13183 592 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 CHIT1Q13231 466 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 LAPTM5Q13571 262 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 UBAP2LQ14157 1087 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 NAA30Q147X3 362 aaPredicted RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 EXT1Q16394 746 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PFKFB4Q16877 469 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 EIF2S3LQ2VIR3 472 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 FHL5Q5TD97 284 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PAPD4Q6PIY7 484 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 FAM180AQ6UWF9 173 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 RIPOR1Q6ZS17 1223 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 Q6ZS92 163 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ISCA2Q86U28 154 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 GSPT2Q8IYD1 628 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 KLHDC8AQ8IYD2 350 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 CNPY4Q8N129 248 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 AFAP1L2Q8N4X5 818 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 FAM26EQ8N5C1 309 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 TEX9Q8N6V9 391 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PDPRQ8NCN5 879 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ARMC2Q8NEN0 867 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 GRHL3Q8TE85 626 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 CREB3L4Q8TEY5 395 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 MZB1Q8WU39 189 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 SLC44A1Q8WWI5 657 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 GAL3ST3Q96A11 431 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PTCD3Q96EY7 689 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PAFAH2Q99487 392 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 EFCAB11Q9BUY7 163 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 SARGQ9BW04 601 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PARD6BQ9BYG5 372 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 REXO4Q9GZR2 422 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ACTR8Q9H981 624 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 LANCL2Q9NS86 450 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ANKRD10Q9NXR5 420 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 STMN3Q9NZ72 180 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ABI3Q9P2A4 366 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ZNF180Q9UJW8 692 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PTBP2Q9UKA9 531 aaKnown RBP6.12□□□□□ -1.43
KDM3B-208ENST00000512928 ASB1Q9Y576 335 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 PCDHGA10Q9Y5H3 936 aa6.12□□□□□ -1.43
KDM3B-208ENST00000512928 MED13Q9UHV7 2174 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 MDC1Q14676 2089 aaKnown RBP6.11□□□□□ -1.43
KDM3B-208ENST00000512928 NBPF19A0A087WUL8 3843 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 A0A087WUV0 522 aaPredicted RBP6.11□□□□□ -1.43
KDM3B-208ENST00000512928 TRAV17A0A0B4J275 112 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 EXOC1LA0A1B0GW35 172 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 BLACEA4D250 179 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 LRIT2A6NDA9 550 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 OR5H15A6NDH6 313 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 ANKUB1A6NFN9 424 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 K7EPI3 171 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 CLDN4O14493 209 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 CLEC3AO75596 197 aa6.11□□□□□ -1.43
KDM3B-208ENST00000512928 MYO1DO94832 1006 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms