RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 DSELQ8IZU8 1212 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ZNF655Q8N720 491 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 POU5F2Q8N7G0 328 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ANKRD53Q8N9V6 530 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 OR8J2Q8NGG1 315 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 NT5CQ8TCD5 201 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 CREB3L4Q8TEY5 395 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 SLC13A3Q8WWT9 602 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 POP5Q969H6 163 aaKnown RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 RGMAQ96B86 450 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 RCN3Q96D15 328 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 PRAP1Q96NZ9 151 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 KCNC2Q96PR1 638 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 HBEGFQ99075 208 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 TBCDQ9BTW9 1192 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 C1orf50Q9BV19 199 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ACAT2Q9BWD1 397 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 MUC13Q9H3R2 512 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 XKR8Q9H6D3 395 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 RMND5AQ9H871 391 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 WDR41Q9HAD4 459 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 SPAG4Q9NPE6 437 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ATAD3AQ9NVI7 634 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 CUEDC1Q9NWM3 386 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 FAM120CQ9NX05 1096 aaKnown RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 SPHK1Q9NYA1 384 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 GIMAP2Q9UG22 337 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 MAN2B2Q9Y2E5 1009 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 DLGAP4Q9Y2H0 992 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 PCDHGA8Q9Y5G5 932 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 HEMK1Q9Y5R4 338 aaPredicted RBP8.69□□□□□ -1.02
NR1I3-228ENST00000511676 GMEB1Q9Y692 573 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 DOCK9Q9BZ29 2069 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 ASXL3Q9C0F0 2248 aa8.69□□□□□ -1.02
NR1I3-228ENST00000511676 DSPP15924 2871 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 A0A088AWK7 358 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 OR6C74A6NCV1 312 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 B4DGG1 531 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 FBP2O00757 339 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 TXNDC9O14530 226 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 HAT1O14929 419 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 CAPN5O15484 640 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ZSCAN9O15535 394 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 NDUFS4O43181 175 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 SIGLEC6O43699 453 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 OR1F1O43749 312 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 PCDH7O60245 1069 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ERN1O75460 977 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 UBXN7O94888 489 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 PGRP06401 933 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ANXA4P09525 319 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 SLC35G6P0C7Q6 338 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 GLB1P16278 677 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 CAPN3P20807 821 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ZNF10P21506 573 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 TRPC1P48995 793 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 MTTPP55157 894 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 UFM1P61960 85 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 KCNJ2P63252 427 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 INSM1Q01101 510 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 KCNC4Q03721 635 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 RGS1Q08116 209 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 SQSTM1Q13501 440 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 DDX39BQ13838 428 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 PDE7AQ13946 482 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 RBBP5Q15291 538 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 TLR1Q15399 786 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 NR0B2Q15466 257 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ZNF542PQ5EBM4 170 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 SAMD4BQ5PRF9 694 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 KIAA1614Q5VZ46 1190 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 RBM44Q6ZP01 1051 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 KANSL1Q7Z3B3 1105 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 NET1Q7Z628 596 aaPredicted RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 NUDT13Q86X67 352 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 SCUBE1Q8IWY4 988 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 DEFB107AQ8IZN7 70 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ZCCHC7Q8N3Z6 543 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 C1orf52Q8N6N3 182 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 CAMKVQ8NCB2 501 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ZNF740Q8NDX6 193 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 VPS37AQ8NEZ2 397 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 OR2L5Q8NG80 312 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 OR9I1Q8NGQ6 314 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 SNRNP27Q8WVK2 155 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 JADE3Q92613 823 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 GAL3ST3Q96A11 431 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 MARVELD3Q96A59 401 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 COL26A1Q96A83 441 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 MTFMTQ96DP5 389 aaKnown RBP8.68□□□□□ -1.02
NR1I3-228ENST00000511676 APIPQ96GX9 242 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 APOLD1Q96LR9 279 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 SH3GL1Q99961 368 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 DPYSL5Q9BPU6 564 aa8.68□□□□□ -1.02
NR1I3-228ENST00000511676 ZFYVE21Q9BQ24 234 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms