RNA–Protein interactions for RNA: ENST00000511459.1

APBB3-217, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-217	ENST00000511459	TRIP6	Q15654	476 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	PRTG	Q2VWP7	1150 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	REP15	Q6BDI9	236 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	PRMT9	Q6P2P2	845 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	GALNT18	Q6P9A2	607 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	ABHD17C	Q6PCB6	329 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	COMMD6	Q7Z4G1	85 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	B3GNT8	Q7Z7M8	397 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	GLRX5	Q86SX6	157 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	ZNF655	Q8N720	491 aa	Predicted RBP	11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	RCBTB1	Q8NDN9	531 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	DEFB124	Q8NES8	71 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	OR2L5	Q8NG80	312 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	UTP15	Q8TED0	518 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	ROPN1L	Q96C74	230 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	SPDL1	Q96EA4	605 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	SMIM10	Q96HG1	83 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	QRFPR	Q96P65	431 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	EBPL	Q9BY08	206 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	SPRTN	Q9H040	489 aa	Predicted RBP	11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	PRDM7	Q9NQW5	492 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	ENAM	Q9NRM1	1142 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	BCAP29	Q9UHQ4	241 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	RAPGEFL1	Q9UHV5	662 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	LEF1	Q9UJU2	399 aa	Predicted RBP	11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	PRPF19	Q9UMS4	504 aa	Known RBP	11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	PCDHGA1	Q9Y5H4	931 aa		11.21	□□□□□ -0.61
APBB3-217	ENST00000511459	ZNF292	O60281	2723 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459		A0A0G2JN53	185 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459		H3BMH7	237 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TXNDC9	O14530	226 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	ERI3	O43414	337 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	PCDH7	O60245	1069 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	PRMT3	O60678	531 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	EED	O75530	441 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	STAMBP	O95630	424 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	MSL3P1	P0C860	447 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	SDC1	P18827	310 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TACR1	P25103	407 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TPP2	P29144	1249 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TIA1	P31483	386 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	RPL3	P39023	403 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	PDX1	P52945	283 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	RAB8A	P61006	207 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	SLC25A3	Q00325	362 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	INSM1	Q01101	510 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TGM3	Q08188	693 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	GPR19	Q15760	415 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	DPY19L1	Q2PZI1	675 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	CCDC157	Q569K6	752 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TCTE1	Q5JU00	501 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	PHF19	Q5T6S3	580 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	OR4C11	Q6IEV9	310 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TMEM214	Q6NUQ4	689 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TRIM40	Q6P9F5	258 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	BLOC1S3	Q6QNY0	202 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	HACD2	Q6Y1H2	254 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	RBM44	Q6ZP01	1051 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	PAGE2	Q7Z2X7	111 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	SCUBE1	Q8IWY4	988 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	DEFB107A	Q8IZN7	70 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	PGAM4	Q8N0Y7	254 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	ARHGEF39	Q8N4T4	335 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	AMER3	Q8N944	861 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	SRFBP1	Q8NEF9	429 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	GAL3ST3	Q96A11	431 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TEFM	Q96QE5	360 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	C17orf62	Q9BQA9	187 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	TBCD	Q9BTW9	1192 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	THTPA	Q9BU02	230 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	CADM1	Q9BY67	442 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	NLN	Q9BYT8	704 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	DDX31	Q9H8H2	851 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	BAIAP2L1	Q9UHR4	511 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	MCM8	Q9UJA3	840 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	ADAM29	Q9UKF5	820 aa		11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	MRPS2	Q9Y399	296 aa	Known RBP	11.2	□□□□□ -0.62
APBB3-217	ENST00000511459	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459		A0A1W2PP18	115 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	GNG14	A0A1W2PPG7	69 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	ARHGAP10	A1A4S6	786 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	HYKK	A2RU49	373 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	FITM1	A5D6W6	292 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	URAD	A6NGE7	173 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	TMEM150C	B9EJG8	249 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	TM4SF5	O14894	197 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	ANKRD28	O15084	1053 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	B3GALT4	O96024	378 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	GBA	P04062	536 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	IL6	P05231	212 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	ANXA4	P09525	319 aa	Predicted RBP	11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	ZNF888	P0CJ79	500 aa	Predicted RBP	11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	CD1E	P15812	388 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	ITGAX	P20702	1163 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	PRPS1L1	P21108	318 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	ATP5A1	P25705	553 aa	Known RBP	11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	HPCAL1	P37235	193 aa		11.19	□□□□□ -0.62
APBB3-217	ENST00000511459	SSR2	P43308	183 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms