RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 BIVMQ86UB2 503 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 TGIF2LYQ8IUE0 185 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 GUF1Q8N442 669 aaKnown RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 ALLCQ8N6M5 410 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 AVL9Q8NBF6 648 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 APPL2Q8NEU8 664 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 OR52I2Q8NH67 350 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 PPP4R1Q8TF05 950 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 HTR3CQ8WXA8 447 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 TMCO6Q96DC7 493 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 ERP27Q96DN0 273 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 CDHR1Q96JP9 859 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 MMP27Q9H306 513 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 FKRPQ9H9S5 495 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 LARSQ9P2J5 1176 aaKnown RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 GAGE2DQ9UEU5 116 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 WBP11Q9Y2W2 641 aaKnown RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 MAGED1Q9Y5V3 778 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 GON4LQ3T8J9 2241 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 A0A0B4J293 547 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 SYNDIG1LA6NDD5 238 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 TSPY2A6NKD2 308 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 EFCAB7A8K855 629 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 K7EQS6 105 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 SGK1O00141 431 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 YKT6O15498 198 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 BUB3O43684 328 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 BUD23O43709 281 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF500O60304 480 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 PRAMEF12O95522 483 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 C22orf31O95567 290 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 FGF19O95750 216 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 F7P08709 466 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 LIPCP11150 499 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF23P17027 643 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 KLK2P20151 261 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ITGA3P26006 1051 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 LMAN1P49257 510 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 CSNK1EP49674 416 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 DLX5P56178 289 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 CD81P60033 236 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 PITX1P78337 314 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 KRT33BQ14525 404 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ZRSR1Q15695 479 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 FAM98BQ52LJ0 330 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 DHRS7BQ6IAN0 325 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 FAM171BQ6P995 826 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 C9orf139Q6ZV77 190 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 TRMT11Q7Z4G4 463 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 SLC9B2Q86UD5 537 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 PHC2Q8IXK0 858 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 GBGT1Q8N5D6 347 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 EID2Q8N6I1 236 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 C1orf52Q8N6N3 182 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 GPATCH11Q8N954 259 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 KBTBD3Q8NAB2 608 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 MCUQ8NE86 351 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF461Q8TAF7 563 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 TAS1R2Q8TE23 839 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 LINGO1Q96FE5 620 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ABHD1Q96SE0 405 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 CDRT15Q96T59 188 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 LRRC1Q9BTT6 524 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 KLHL4Q9C0H6 718 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 CHMP1AQ9HD42 196 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ABCF3Q9NUQ8 709 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 TAS2R14Q9NYV8 317 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 MTRRQ9UBK8 725 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 YIPF1Q9Y548 306 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 FAM169AQ9Y6X4 670 aa3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ZFC3H1O60293 1989 aaKnown RBP3.31□□□□□ -1.88
TOPBP1-208ENST00000511439 ANK1P16157 1881 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 NUP210Q8TEM1 1887 aaPredicted RBP3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 A0A0G2JNG1 304 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 A0A1B0GTQ1 180 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 hCG_1809904A0A1W2PP81 198 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 A0A1W2PPE2 198 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 A0A1W2PR64 198 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 ARL5CA6NH57 179 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 A6NL46 340 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 C15orf62A8K5M9 175 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 MAGEB17A8MXT2 336 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 JAK2O60674 1132 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 SOCS5O75159 536 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 CREG1O75629 220 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 TNFSF15O95150 251 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 ZWINTO95229 277 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 BMP10O95393 424 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 THEGLP0DJG4 465 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 PDHBP11177 359 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 TOP1P11387 765 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 COX6B1P14854 86 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 PTMSP20962 102 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 KRT20P35900 424 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 TDO2P48775 406 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 LIG4P49917 911 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 GPC3P51654 580 aa3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 RPL24P83731 157 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 POU5F1Q01860 360 aaKnown RBP3.3□□□□□ -1.88
TOPBP1-208ENST00000511439 ROR1Q01973 937 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms