RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SNRPNP63162 240 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 CAV1Q03135 178 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 EFTUD2Q15029 972 aaKnown RBP eCLIP12.74□□□□□ -0.379e-9■■■■□ 22.8
CCHCR1-227ENST00000508852 TGFBIQ15582 683 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 TSNQ15631 228 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 TOR1AIP1Q5JTV8 583 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 FCRLBQ6BAA4 426 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 SPINK14Q6IE38 97 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 TRIM40Q6P9F5 258 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 Q6ZPB1 254 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 SLCO4C1Q6ZQN7 724 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 GPSM1Q86YR5 675 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 GPALPP1Q8IXQ4 340 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 ZNF595Q8IYB9 648 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 CA13Q8N1Q1 262 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 GHDCQ8N2G8 530 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 B3GNT7Q8NFL0 401 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 UBE2E3Q969T4 207 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 KIAA1191Q96A73 305 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 SIGLEC12Q96PQ1 595 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 KRT12Q99456 494 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 WDR83Q9BRX9 315 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 EFCAB11Q9BUY7 163 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 TRIM31Q9BZY9 425 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 KLHL1Q9NR64 748 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 RYDENQ9NUL5 291 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 DNAJC11Q9NVH1 559 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 ZNF835Q9Y2P0 537 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 KLF13Q9Y2Y9 288 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
CCHCR1-227ENST00000508852 CCDC189A1A4V9 331 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 LRIT2A6NDA9 550 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 FAM227AF5H4B4 570 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 NME2P1O60361 137 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 STK16O75716 305 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 NEURL1O76050 574 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 NME2P22392 152 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 TPP2P29144 1249 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 SERPINB1P30740 379 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 SPRP35270 261 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 HNF4AP41235 474 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 RPL21P46778 160 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 RAB38P57729 211 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 OLR1P78380 273 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 BTN3A2P78410 334 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 HYAL2Q12891 473 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 MAPKAPK3Q16644 382 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 GALNTL5Q7Z4T8 443 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 SPPL2CQ8IUH8 684 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 TMEM132CQ8N3T6 1108 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 OR2L5Q8NG80 312 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 ITLN2Q8WWU7 325 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 CCT6BQ92526 530 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 PTCD3Q96EY7 689 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 VMP1Q96GC9 406 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 CCDC120Q96HB5 630 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 PWWP2AQ96N64 755 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 FRMD6Q96NE9 622 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 SERINC2Q96SA4 455 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 ERP44Q9BS26 406 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 MCMBPQ9BTE3 642 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 COPS7BQ9H9Q2 264 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 WWOXQ9NZC7 414 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 PPIEQ9UNP9 301 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 SNX24Q9Y343 169 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 SPACA6W5XKT8 324 aa12.73□□□□□ -0.37
CCHCR1-227ENST00000508852 PRRG2O14669 202 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ERI3O43414 337 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ASNA1O43681 348 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 CCDC166P0CW27 439 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ZNF24P17028 368 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 TFEBP19484 476 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 GP5P40197 560 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 MTTPP55157 894 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 BTG2P78543 158 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 BIKQ13323 160 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 NAB1Q13506 487 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 SLBPQ14493 270 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 TBCCQ15814 346 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ZNF630Q2M218 657 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 ADPRMQ3LIE5 342 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 GRTP1Q5TC63 336 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 CEP97Q8IW35 865 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 TMEM156Q8N614 296 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 NFAM1Q8NET5 270 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 DAZLQ92904 295 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 MS4A6EQ96DS6 147 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 WDR34Q96EX3 536 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 GPR22Q99680 433 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 RBBP8Q99708 897 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 NPAS2Q99743 824 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 REXO4Q9GZR2 422 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 SPNS1Q9H2V7 528 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 RHBGQ9H310 441 aa12.72□□□□□ -0.37
CCHCR1-227ENST00000508852 KLHL31Q9H511 634 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms