RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 MAGEA3P43357 314 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 SCTRP47872 440 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 CDKN2DP55273 166 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 MYBPHQ13203 477 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 CA13Q8N1Q1 262 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 TBC1D19Q8N5T2 526 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 PSD4Q8NDX1 1056 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 MCUQ8NE86 351 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 ARMC2Q8NEN0 867 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 OR5M3Q8NGP4 307 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 SMIM10Q96HG1 83 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 RBSNQ9H1K0 784 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 CXXC4Q9H2H0 198 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 KLHL31Q9H511 634 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 XAB2Q9HCS7 855 aaKnown RBP12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 HOMER3Q9NSC5 361 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 PNPLA3Q9NST1 481 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 ARL15Q9NXU5 204 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 KCMF1Q9P0J7 381 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 MAD1L1Q9Y6D9 718 aa12.89□□□□□ -0.35
TSPAN17-206ENST00000507471 FAM221AA4D161 298 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 URADA6NGE7 173 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 NPIPA2E9PIF3 369 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 NPIPA3F8WFD2 350 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 PRKNO60260 465 aaPredicted RBP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 CXCR5P32302 372 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 SSR4P51571 173 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 REEP5Q00765 189 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 CSHL1Q14406 222 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 TERF2Q15554 542 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 GXYLT1Q4G148 440 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 RBM20Q5T481 1227 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 TTC27Q6P3X3 843 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 ACAD11Q709F0 780 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 SCUBE1Q8IWY4 988 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 CLYBLQ8N0X4 340 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 C2CD4AQ8NCU7 369 aaPredicted RBP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 TRPV3Q8NET8 790 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 SLC5A11Q8WWX8 675 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 FBXL8Q96CD0 374 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 SIGLEC10Q96LC7 697 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 TSNARE1Q96NA8 513 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 AICDAQ9GZX7 198 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 ZDHHC11Q9H8X9 412 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 TIMMDC1Q9NPL8 285 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 PNO1Q9NRX1 252 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 PPIEQ9UNP9 301 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 MMACHCQ9Y4U1 282 aa12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 SETD2Q9BYW2 2564 aaPredicted RBP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 PHF3Q92576 2039 aaKnown RBP12.88□□□□□ -0.35
TSPAN17-206ENST00000507471 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 TMEM200CA6NKL6 621 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 A8MVJ9 347 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 TGFBR3LH3BV60 316 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 ZWINTO95229 277 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 GUCA1CO95843 209 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 GABRB3P28472 473 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 PPP2R1BP30154 601 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 GPR143P51810 404 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 PGGT1BP53609 377 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 AP1S2P56377 157 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 PPIAP62937 165 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 PLGLB1Q02325 96 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 TOR1AIP1Q5JTV8 583 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 C16orf47Q6ZP98 133 aaPredicted RBP12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 TGIF2LYQ8IUE0 185 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 OR2M7Q8NG81 312 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 OR5M9Q8NGP3 310 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 NCLNQ969V3 563 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 FOXC2Q99958 501 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 TTTY12Q9BZ98 90 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 LIN28AQ9H9Z2 209 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 CCM2LQ9NUG4 571 aaPredicted RBP12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 HPF1Q9NWY4 346 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 ERVK-11Q9UQG0 969 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 YARS2Q9Y2Z4 477 aaKnown RBP12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 CLDN16Q9Y5I7 305 aa12.87□□□□□ -0.35
TSPAN17-206ENST00000507471 A0A0G2JMM0 328 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 A0A1W2PPB8 328 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 A0A1W2PRS3 328 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 KIR3DP1A8MWS1 328 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 ACOT7O00154 380 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 OR2J2O76002 312 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 ACVR2AP27037 513 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 IL2P60568 153 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 BTN3A2P78410 334 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 FOLH1Q04609 750 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 RBBP5Q15291 538 aaKnown RBP12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 XKR6Q5GH73 641 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 IL20RBQ6UXL0 311 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 TMPRSS11BQ86T26 416 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 NAT8LQ8N9F0 302 aa12.86□□□□□ -0.35
TSPAN17-206ENST00000507471 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms