RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CEACAM7Q14002 265 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 GK2Q14410 553 aaPredicted RBP2.93□□□□□ -1.94
LSM6-205ENST00000507449 MAPK11Q15759 364 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 SGSM1Q2NKQ1 1148 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 CES4AQ5XG92 561 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 TCEAL6Q6IPX3 200 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 ALKBH5Q6P6C2 394 aaKnown RBP2.93□□□□□ -1.94
LSM6-205ENST00000507449 Q6ZVQ6 151 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 RAPH1Q70E73 1250 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 SLC43A2Q8N370 569 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 CCDC185Q8N715 623 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 OR5T2Q8NGG2 359 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 SLCO2A1Q92959 643 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 CNRIP1Q96F85 164 aaPredicted RBP2.93□□□□□ -1.94
LSM6-205ENST00000507449 PRAM1Q96QH2 718 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 KRT12Q99456 494 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 IL12RB2Q99665 862 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 DDX50Q9BQ39 737 aaKnown RBP2.93□□□□□ -1.94
LSM6-205ENST00000507449 CCM2Q9BSQ5 444 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 BARHL1Q9BZE3 327 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 WWTR1Q9GZV5 400 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 SPHK2Q9NRA0 654 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 DBF4Q9UBU7 674 aaPredicted RBP2.93□□□□□ -1.94
LSM6-205ENST00000507449 MAD2L2Q9UI95 211 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 APPL1Q9UKG1 709 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 PLCL2Q9UPR0 1127 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 ETV7Q9Y603 341 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 IGHV3-20A0A0C4DH32 117 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 hCG_38984A0A1B0GV85 526 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 ATP6AP2A0A1C7CYW4 349 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 NKX6-3A6NJ46 265 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 CYSRT1A8MQ03 144 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 A8MU76 341 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 MPTX1A8MV57 137 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 CACNB4O00305 520 aaPredicted RBP2.92□□□□□ -1.94
LSM6-205ENST00000507449 CHUKO15111 745 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 SYT7O43581 403 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 SOCS5O75159 536 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 NXPH2O95156 264 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 CXCL14O95715 111 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 BAG2O95816 211 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 PNPP00491 289 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 CALCAP01258 141 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 MT-ND3P03897 115 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 CHRNGP07510 517 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 B4GALT1P15291 398 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 ACKR3P25106 362 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 CTNNA2P26232 953 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 FEN1P39748 380 aaKnown RBP2.92□□□□□ -1.94
LSM6-205ENST00000507449 TNFSF10P50591 281 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 BACE1P56817 501 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 EVCP57679 992 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 PDE7AQ13946 482 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 KRTAP27-1Q3LI81 207 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 GFI1BQ5VTD9 330 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 MACC1Q6ZN28 852 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 FRRS1Q6ZNA5 592 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 ZNF614Q8N883 585 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 RNF149Q8NC42 400 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 OR4D10Q8NGI6 311 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 GPR148Q8TDV2 347 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 ATP8B4Q8TF62 1192 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 CCDC43Q96MW1 224 aaKnown RBP2.92□□□□□ -1.94
LSM6-205ENST00000507449 SYT15Q9BQS2 421 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 NUSAP1Q9BXS6 441 aaKnown RBP2.92□□□□□ -1.94
LSM6-205ENST00000507449 DGCR6LQ9BY27 220 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 TSPYL1Q9H0U9 437 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 MTIF3Q9H2K0 278 aaKnown RBP2.92□□□□□ -1.94
LSM6-205ENST00000507449 ZNF665Q9H7R5 613 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 DBNDD1Q9H9R9 158 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 TXLNGQ9NUQ3 528 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 FOXA2Q9Y261 457 aaPredicted RBP2.92□□□□□ -1.94
LSM6-205ENST00000507449 ITM2BQ9Y287 266 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 EXOC6BQ9Y2D4 811 aa2.92□□□□□ -1.94
LSM6-205ENST00000507449 MYH14Q7Z406 1995 aaKnown RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 C2orf92A0A1B0GVN3 265 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 SLC15A5A6NIM6 579 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 K7EQD1 137 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 RNF103O00237 685 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 PSMD3O43242 534 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 NXPH4O95158 308 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 ANGPTL1O95841 491 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 SKILP12757 684 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 TYMPP19971 482 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 PRKACGP22612 351 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 MT3P25713 68 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 SLC1A3P43003 542 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 TSFMP43897 325 aaKnown RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 GSCP56915 257 aaPredicted RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 HYAL1Q12794 435 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 FAM189A2Q15884 450 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 C3AR1Q16581 482 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 EPC2Q52LR7 807 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 ADAM5Q6NVV9 412 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 TMEM64Q6YI46 380 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 KIF6Q6ZMV9 814 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 ZNF410Q86VK4 478 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 STHQ8IWL8 128 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 THEM5Q8N1Q8 247 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 ZNF248Q8NDW4 579 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms