RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 GAL3ST3Q96A11 431 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 PDLIM2Q96JY6 352 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 DEFB126Q9BYW3 111 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 TRIM31Q9BZY9 425 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 TRIM45Q9H8W5 580 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 CTNNAL1Q9UBT7 734 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 MMACHCQ9Y4U1 282 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 PKDREJQ9NTG1 2253 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 EML6Q6ZMW3 1958 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 C19orf84I3L1E1 186 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 H2AFYO75367 372 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 MYO1DO94832 1006 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 SEC31AO94979 1220 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 C1GALT1C1LP0DN25 315 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 ELAVL4P26378 380 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 HNRNPH1P31943 449 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 PTGER1P34995 402 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 GDF5P43026 501 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 SLC6A12P48065 614 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 HNMTP50135 292 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 MEOX1P50221 254 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 STXBP1P61764 594 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 RUNX2Q13950 521 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 SLBPQ14493 270 aaKnown RBP eCLIP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 SLCO4C1Q6ZQN7 724 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 CAPN12Q6ZSI9 719 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 ADAMTSL2Q86TH1 951 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 CEP97Q8IW35 865 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 CHERPQ8IWX8 916 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 SCUBE1Q8IWY4 988 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 KLHDC8AQ8IYD2 350 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 ARMC10Q8N2F6 343 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 APCDD1LQ8NCL9 501 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 B3GNT7Q8NFL0 401 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 AGAP11Q8TF27 550 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 CCT6BQ92526 530 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 TMEM125Q96AQ2 219 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 RHBDF1Q96CC6 855 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 MTFMTQ96DP5 389 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 FAR2Q96K12 515 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 RUNDC3BQ96NL0 473 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 PHF12Q96QT6 1004 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 TRIM8Q9BZR9 551 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 KCNF1Q9H3M0 494 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 PNO1Q9NRX1 252 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 MOCS1Q9NZB8 636 aa10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF223Q9UK11 482 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 KLF13Q9Y2Y9 288 aaPredicted RBP10.78□□□□□ -0.68
HMGCS1-204ENST00000507293 LRBAP50851 2863 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 NCF1BA6NI72 391 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 USP27XA6NNY8 438 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 NCF1CA8MVU1 366 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 E7ESA3 106 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TGFBR3LH3BV60 316 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 PRRG2O14669 202 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TFECO14948 347 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TP73O15350 636 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 ERI3O43414 337 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 CLDN14O95500 239 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 NCF1P14598 390 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 GNAZP19086 355 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 PPP2R1BP30154 601 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 RFC3P40938 356 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 CLCN2P51788 898 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 HNRNPFP52597 415 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 RAB38P57729 211 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TMIGD1Q6UXZ0 262 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 C3P1Q6ZMU1 363 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 FGD2Q7Z6J4 655 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 DOLPP1Q86YN1 238 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 CREG2Q8IUH2 290 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 KRT78Q8N1N4 520 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TMEM156Q8N614 296 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 FAM47BQ8NA70 645 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 POGLUT1Q8NBL1 392 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TMEM52Q8NDY8 209 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TTLQ8NG68 377 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 PHF10Q8WUB8 498 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 MS4A6EQ96DS6 147 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 VMP1Q96GC9 406 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 VPS39Q96JC1 886 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 QRFPRQ96P65 431 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 TMEM79Q9BSE2 394 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 NPLQ9BXD5 320 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 RHOJQ9H4E5 214 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 POPDC3Q9HBV1 291 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 PRTFDC1Q9NRG1 225 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 SMYD2Q9NRG4 433 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 FBXW2Q9UKT8 454 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 ASB1Q9Y576 335 aa10.77□□□□□ -0.69
HMGCS1-204ENST00000507293 LRIT2A6NDA9 550 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 EFCAB8A8MWE9 144 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 KLRC4-KLRK1H3BQV0 150 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 ADAM10O14672 748 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 B3GALT2O43825 422 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 ITGA10O75578 1167 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 PIAS1O75925 651 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 GSTM2P28161 218 aa10.76□□□□□ -0.69
HMGCS1-204ENST00000507293 RPL21P46778 160 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms