RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TAAR6Q96RI8 345 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 ATOH8Q96SQ7 321 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 LPAR4Q99677 370 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 FUT8Q9BYC5 575 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 IGSF5Q9NSI5 407 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 STMN3Q9NZ72 180 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 TEKT2Q9UIF3 430 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 ERRFI1Q9UJM3 462 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF490Q9ULM2 529 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 CLDN16Q9Y5I7 305 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 UTP20O75691 2785 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 CCDC189A1A4V9 331 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 SAGE2PA6NJ88 616 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 CLGNO14967 610 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 MAN1A2O60476 641 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 PRMT3O60678 531 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 B4GALT2O60909 372 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 KERAO60938 352 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 H2AFYO75367 372 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 F10P00742 488 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 LDLRP01130 860 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 LTA4HP09960 611 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 MTHFD2P13995 350 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 TFEBP19484 476 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 CRABP2P29373 138 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 HNF4AP41235 474 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 OR4D2P58180 307 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF33BQ06732 778 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 RUNX2Q13950 521 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 DOC2AQ14183 400 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 SLMAPQ14BN4 828 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 TBCCQ15814 346 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 PDK4Q16654 411 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 ACER2Q5QJU3 275 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 UBAP2Q5T6F2 1119 aaKnown RBP8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 ADNP2Q6IQ32 1131 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 FAM180AQ6UWF9 173 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 LRRC70Q7Z2Q7 622 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 CCDC91Q7Z6B0 441 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 CRLF3Q8IUI8 442 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 SCUBE1Q8IWY4 988 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 LGI4Q8N135 537 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 BEST3Q8N1M1 668 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 ARMC10Q8N2F6 343 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 BCORP1Q8N888 145 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 MDS2Q8NDY4 140 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 NFAM1Q8NET5 270 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 OR2L5Q8NG80 312 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 STAG3L4Q8TBR4 150 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 NR4A3Q92570 626 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF354BQ96LW1 612 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 PTCHD1Q96NR3 888 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 EFCAB11Q9BUY7 163 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 NPLQ9BXD5 320 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 CD244Q9BZW8 370 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 RHBGQ9H310 441 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 ALG9Q9H6U8 611 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 KCNK13Q9HB14 408 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 NMRAL1Q9HBL8 299 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 NECTIN3Q9NQS3 549 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 PRDM9Q9NQV7 894 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 OLAHQ9NV23 265 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 NUDT4Q9NZJ9 180 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 CD274Q9NZQ7 290 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 RNF112Q9ULX5 631 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 SLC5A6Q9Y289 635 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 MMACHCQ9Y4U1 282 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 PCDHGB6Q9Y5F9 930 aa8.51□□□□□ -1.05
PDLIM5-209ENST00000506632 DIDO1Q9BTC0 2240 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 A0A0G2JN53 185 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ANKDD1BA6NHY2 528 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 A8MUI8 341 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 FAM227AF5H4B4 570 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 TGFBR3LH3BV60 316 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 PSMD12O00232 456 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 CDK2AP1O14519 115 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ERI3O43414 337 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 PRAMEF2O60811 474 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 URI1O94763 535 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 C2P06681 752 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 UQCRHP07919 91 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 MAOAP21397 527 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 RAB38P57729 211 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 BTN3A2P78410 334 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ACTN3Q08043 901 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 CHIT1Q13231 466 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 TUBA3CQ13748 450 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 BMPR2Q13873 1038 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ELOAQ14241 798 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 MEP1AQ16819 746 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 XKR6Q5GH73 641 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 FCRLBQ6BAA4 426 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 ABHD17CQ6PCB6 329 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 TUBA3EQ6PEY2 450 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 RAPH1Q70E73 1250 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 TBC1D1Q86TI0 1168 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 LAS2Q8IYD9 372 aa8.5□□□□□ -1.05
PDLIM5-209ENST00000506632 SLC5A8Q8N695 610 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms