RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 A0A1W2PQ72 361 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 RTCAO00442 366 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 TGFB1P01137 390 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 PDGFAP04085 211 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 FHP07954 510 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 COX6A1P12074 109 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 ACPPP15309 386 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 NR1D1P20393 614 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 CERS1P27544 350 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 ARL1P40616 181 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 PIK3CBP42338 1070 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 CCT5P48643 541 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 RHAGQ02094 409 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 CLCQ05315 142 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 EEF1A2Q05639 463 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 RUNX2Q13950 521 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 TUBB8Q3ZCM7 444 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 CCDC153Q494R4 210 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 GGTA1PQ4G0N0 100 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 MFSD4BQ5TF39 518 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 TRIM40Q6P9F5 258 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 LANCL3Q6ZV70 420 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 SLC22A9Q8IVM8 553 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 SRRM1Q8IYB3 904 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 AMER2Q8N7J2 671 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 BANPQ8N9N5 519 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 TRPC4APQ8TEL6 797 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 ATP6V1E2Q96A05 226 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 TBC1D20Q96BZ9 403 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 APOPT1Q96IL0 206 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 FAR2Q96K12 515 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 FER1L6-AS2Q96M78 137 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 OR51B5Q9H339 312 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 RRAGDQ9NQL2 400 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 PRDM7Q9NQW5 492 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 GRID1Q9ULK0 1009 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 TP53TG5Q9Y2B4 290 aa17.2■□□□□ 0.34
PDLIM7-216ENST00000506537 TNRC6AQ8NDV7 1962 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 LOC102723996A0A087X1L8 192 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 MAGEB17A8MXT2 336 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 FAM227AF5H4B4 570 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 MKRN2OSH3BPM6 223 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 SAP18O00422 153 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 SUPT7LO94864 414 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 ETHE1O95571 254 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 MYL2P10916 166 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 CREB1P16220 341 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 IMPDH1P20839 514 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 IL10P22301 178 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 HPDP32754 393 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 NEK2P51955 445 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 RPS13P62277 151 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 Q0VFX4 171 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 KRT71Q3SY84 523 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 KHDRBS2Q5VWX1 349 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 FDCSPQ8NFU4 85 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 TSLPQ969D9 159 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 CMTM7Q96FZ5 175 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 KCNC2Q96PR1 638 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 NUDT9Q9BW91 350 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 SORBS1Q9BX66 1292 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 SLC25A18Q9H1K4 315 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 CLK4Q9HAZ1 481 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 ZNF71Q9NQZ8 489 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 ADGRE2Q9UHX3 823 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 SCN2AQ99250 2005 aa17.19■□□□□ 0.34
PDLIM7-216ENST00000506537 GCN1Q92616 2671 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 IGHV1-45A0A0A0MS14 117 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 A6NL46 340 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 B3GALT2O43825 422 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 OTCP00480 354 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 CYC1P08574 325 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 C8orf89P0DMQ9 161 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 SFTPCP11686 197 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 RNH1P13489 461 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 MTTPP55157 894 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 RAPSNQ13702 412 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 PCOLCEQ15113 449 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 TMEM35AQ53FP2 167 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 DEPDC1Q5TB30 811 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 MILR1Q7Z6M3 343 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 GALNT16Q8N428 558 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 ZNF843Q8N446 348 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 CLEC1AQ8NC01 280 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 ZBTB9Q96C00 473 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 REPS1Q96D71 796 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 ZIM3Q96PE6 472 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 SERINC2Q96SA4 455 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 ZNF382Q96SR6 550 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 SLC25A23Q9BV35 468 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 NPLQ9BXD5 320 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 GSTO2Q9H4Y5 243 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 PLLPQ9Y342 182 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 PCDHGA9Q9Y5G4 932 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 COL6A6A6NMZ7 2263 aa17.18■□□□□ 0.34
PDLIM7-216ENST00000506537 A0A088AWK7 358 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 IGHV3-20A0A0C4DH32 117 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms