RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 LIPT1Q9Y234 373 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 HBS1LQ9Y450 684 aaKnown RBP5.26□□□□□ -1.57
HERC4-213ENST00000506515 AKAP11Q9UKA4 1901 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 DLEC1Q9Y238 1755 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 NRXN2Q9P2S2 1712 aa5.26□□□□□ -1.57
HERC4-213ENST00000506515 KIF7Q2M1P5 1343 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 ERVV-1B6SEH8 477 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 SLC33A1O00400 549 aaPredicted RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 ZNF263O14978 683 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 AMBPP02760 352 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 SP1P08047 785 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 SP9P0CG40 484 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 RPS12P25398 132 aaKnown RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 DUTP33316 252 aaKnown RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 TNNT2P45379 298 aaPredicted RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 ST8SIA6P61647 398 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 RCN2Q14257 317 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 PODNL1Q6PEZ8 512 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 PPP1R42Q7Z4L9 355 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 MEX3DQ86XN8 651 aaKnown RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 MARVELD2Q8N4S9 558 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 KIAA0895Q8NCT3 520 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 UBLCP1Q8WVY7 318 aaPredicted RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 DNASE2BQ8WZ79 361 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 DYRK2Q92630 601 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 FBXO17Q96EF6 278 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 BTBD9Q96Q07 612 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 CDCA3Q99618 268 aaPredicted RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 RAVER2Q9HCJ3 691 aaKnown RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 CWC25Q9NXE8 425 aaPredicted RBP5.25□□□□□ -1.57
HERC4-213ENST00000506515 RNF186Q9NXI6 227 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 EPHA6Q9UF33 1036 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 NIP7Q9Y221 180 aaKnown RBP eCLIP5.25□□□□□ -1.57
HERC4-213ENST00000506515 KNSTRNQ9Y448 316 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 KLK4Q9Y5K2 254 aa5.25□□□□□ -1.57
HERC4-213ENST00000506515 C2CD4DB7Z1M9 353 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 HHLA1C9JL84 531 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 FMO6PO60774 539 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 NME6O75414 186 aaPredicted RBP5.24□□□□□ -1.57
HERC4-213ENST00000506515 DLATP10515 647 aaKnown RBP5.24□□□□□ -1.57
HERC4-213ENST00000506515 CEACAM1P13688 526 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 ITGB6P18564 788 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 PIK3R1P27986 724 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 OAS2P29728 719 aaKnown RBP5.24□□□□□ -1.57
HERC4-213ENST00000506515 NF2P35240 595 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 EPS15P42566 896 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 ZNF876PQ49A33 203 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 KLHDC8BQ8IXV7 354 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 RCOR2Q8IZ40 523 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 OR4C15Q8NGM1 316 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 OR1L3Q8NH93 324 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 RBM41Q96IZ5 413 aaKnown RBP5.24□□□□□ -1.57
HERC4-213ENST00000506515 SRD5A3Q9H8P0 318 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 TMEM161AQ9NX61 479 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 SLX4Q8IY92 1834 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 A0A0C4DFX4 3053 aa5.24□□□□□ -1.57
HERC4-213ENST00000506515 IL16Q14005 1332 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 IGHV4-4A0A075B6R2 117 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 TRAV18A0A075B6X5 111 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 A0A087WYN8 130 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 E5RGE8 158 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 H3BMM5 538 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 HTATSF1O43719 755 aaKnown RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 AP2A2O94973 939 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 GH1P01241 217 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 RAF1P04049 648 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 SLC2A2P11168 524 aaPredicted RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 EEF2P13639 858 aaKnown RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 GNB3P16520 340 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 SLC39A6Q13433 755 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 SMU1Q2TAY7 513 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 PARP10Q53GL7 1025 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 GLRA4Q5JXX5 417 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.23□□□□□ -1.57
HERC4-213ENST00000506515 OR4C11Q6IEV9 310 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 BTN2A1Q7KYR7 527 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 ANKRD46Q86W74 232 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 LACC1Q8IV20 430 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 CLYBLQ8N0X4 340 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 GBP7Q8N8V2 638 aaPredicted RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 APOBEC4Q8WW27 367 aaKnown RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 ARHGAP45Q92619 1136 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 PTP4A1Q93096 173 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 C10orf90Q96M02 699 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 NECTIN4Q96NY8 510 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 LPAR4Q99677 370 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 PI4K2AQ9BTU6 479 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 RSPH9Q9H1X1 276 aaPredicted RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 PDRG1Q9NUG6 133 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 DNAJC17Q9NVM6 304 aaKnown RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 SLCO1C1Q9NYB5 712 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 CNIH4Q9P003 139 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 LEF1Q9UJU2 399 aaPredicted RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 NOCTQ9UK39 431 aaKnown RBP5.23□□□□□ -1.57
HERC4-213ENST00000506515 FBXL5Q9UKA1 691 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 GPR132Q9UNW8 380 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 NSG2Q9Y328 171 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 ATP6V0A2Q9Y487 856 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 KIF20BQ96Q89 1820 aa5.23□□□□□ -1.57
HERC4-213ENST00000506515 MSGN1A6NI15 193 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms