RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZNF770Q6IQ21 691 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRR5LQ6MZQ0 368 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 C16orf82Q7Z2V1 217 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 ASPGQ86U10 573 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 LAX1Q8IWV1 398 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 TTC5Q8N0Z6 440 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 MRPL43Q8N983 215 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 LMNTD1Q8N9Z9 388 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 OLIG1Q8TAK6 271 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 KIAA1524Q8TCG1 905 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 RNASE8Q8TDE3 154 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 METTL21AQ8WXB1 218 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRCCQ92733 491 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 MED30Q96HR3 178 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 EPSTI1Q96J88 318 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF479Q96JC4 524 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF583Q96ND8 569 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 PKP2Q99959 881 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 FAM213AQ9BRX8 229 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZPBPQ9BS86 351 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 TRMT61BQ9BVS5 477 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 TEX13AQ9BXU3 409 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 ACPTQ9BZG2 426 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 XPO4Q9C0E2 1151 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR2B2Q9GZK3 357 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 FAM49AQ9H0Q0 323 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 TSPYL1Q9H0U9 437 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 CPVLQ9H3G5 476 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 DDX31Q9H8H2 851 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 RPF1Q9H9Y2 349 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 SYTL2Q9HCH5 934 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 MRPL17Q9NRX2 175 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 HPF1Q9NWY4 346 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 NINJ2Q9NZG7 142 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 EPS15L1Q9UBC2 864 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 TRIM10Q9UDY6 481 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 NARFQ9UHQ1 456 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 TRMT6Q9UJA5 497 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 TSPAN16Q9UKR8 245 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 CCPG1Q9ULG6 757 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 FAF1Q9UNN5 650 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 PIN4Q9Y237 131 aaKnown RBP2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 ABCC12Q96J65 1359 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 SCN7AQ01118 1682 aa2.94□□□□□ -1.94
TRAPPC11-205ENST00000506426 ARID2Q68CP9 1835 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 BRCA1P38398 1863 aaKnown RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF831Q5JPB2 1677 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 IGLV9-49A0A0B4J1Y8 123 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 C2orf92A0A1B0GVN3 265 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ANKDD1BA6NHY2 528 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 LACTBL1A8MY62 500 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRAC2D3DTV9 90 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 H0YIG0 161 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 M0R296 226 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 TXNL1O43396 289 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRKNO60260 465 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ACSL4O60488 711 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 CAVIN2O95810 425 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 GAS8O95995 478 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 SLC4A1P02730 911 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ALPLP05186 524 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 IGKV2-30P06310 120 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 CETPP11597 493 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 KRT3P12035 628 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 LHCGRP22888 699 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 AHCYP23526 432 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ELAVL4P26378 380 aaKnown RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ALDH1B1P30837 517 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRKAR2BP31323 418 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR3A3P47888 321 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ATXN3P54252 364 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 LCP2Q13094 533 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 TRA2AQ13595 282 aaKnown RBP eCLIP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 GAMTQ14353 236 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 HERC3Q15034 1050 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 PDLIM3Q53GG5 364 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ARMCX4Q5H9R4 360 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 NADSYN1Q6IA69 706 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 KLHL10Q6JEL2 608 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 NEK5Q6P3R8 708 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 MFSD7Q6UXD7 560 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 FAM43BQ6ZT52 329 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ANO5Q75V66 913 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 BTN2A1Q7KYR7 527 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 MCM10Q7L590 875 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ARMC9Q7Z3E5 817 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 CCDC60Q8IWA6 550 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 RCOR2Q8IZ40 523 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 BATF2Q8N1L9 274 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 THEM5Q8N1Q8 247 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 MAB21L3Q8N8X9 362 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 CNBD1Q8NA66 436 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 CCNYQ8ND76 341 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 DMBX1Q8NFW5 382 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR13A1Q8NGR1 328 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR13C3Q8NGS6 347 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 EXOC6Q8TAG9 804 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 VOPP1Q96AW1 172 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 LGALS12Q96DT0 336 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ST6GAL2Q96JF0 529 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms