RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MARCH9Q86YJ5 346 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 TBC1D19Q8N5T2 526 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 DNAJB14Q8TBM8 379 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 RGMAQ96B86 450 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ANKRD9Q96BM1 317 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 TM4SF18Q96CE8 201 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 COQ8BQ96D53 544 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 SEMA4CQ9C0C4 833 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 IQCGQ9H095 443 aaKnown RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 ILKAPQ9H0C8 392 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 NKIRAS1Q9NYS0 192 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 VPS29Q9UBQ0 182 aa7.83□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLC35G6P0C7Q6 338 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MAP3K8P41279 467 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 PCBP4P57723 403 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 VSX2P58304 361 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 HIST2H2ACQ16777 129 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TOR1AIP1Q5JTV8 583 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 FHL5Q5TD97 284 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 HIST2H2AA3Q6FI13 130 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 WDR75Q8IWA0 830 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 RNF175Q8N4F7 328 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZSCAN1Q8NBB4 408 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 SRFBP1Q8NEF9 429 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 NFAM1Q8NET5 270 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 RNF138Q8WVD3 245 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 CTHRC1Q96CG8 243 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MTERF3Q96E29 417 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 C19orf60Q96EN9 201 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 WDR77Q9BQA1 342 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF700Q9H0M5 742 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MMACHCQ9Y4U1 282 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 GPR45Q9Y5Y3 372 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TCRBV16S1A1N1A0A5B0 115 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 HDAC3O15379 428 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 PRMT3O60678 531 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TNFSF15O95150 251 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 KRT6AP02538 564 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 KRT6BP04259 564 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ALDOCP09972 364 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TIA1P31483 386 aaKnown RBP eCLIP7.82□□□□□ -1.169e-7■■□□□ 13.1
CDC42SE2-208ENST00000505065 KRT6CP48668 564 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MTTPP55157 894 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TNFRSF17Q02223 184 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 RGS1Q08116 209 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MGAT2Q10469 447 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 C6orf15Q6UXA7 325 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ACAT2Q9BWD1 397 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 REXO4Q9GZR2 422 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MYLK2Q9H1R3 596 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ACTR8Q9H981 624 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ACTR5Q9H9F9 607 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 INTS9Q9NV88 658 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 NXT1Q9UKK6 140 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 STMND1H3BQB6 276 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 PIP5K1BO14986 540 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 POLR1CO15160 346 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 SCN2BO60939 215 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 EEDO75530 441 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 DRD4P21917 467 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 HNRNPH2P55795 449 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 NCF4Q15080 339 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MUM1Q2TAK8 710 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 COMMD6Q7Z4G1 85 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 NLGN4XQ8N0W4 816 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ANKS4BQ8N8V4 417 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TMEM52Q8NDY8 209 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 NLGN4YQ8NFZ3 816 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 GOT1L1Q8NHS2 421 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 C10orf82Q8WW14 230 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 EXT2Q93063 718 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TESCQ96BS2 214 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 APIPQ96GX9 242 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 PNPOQ9NVS9 261 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 LAMA5O15230 3695 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 A0A0J9YVX5 310 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 LOC101059948A0A1B0GTJ6 334 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 TRABD2BA6NFA1 517 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 URADA6NGE7 173 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MYO1GB0I1T2 1018 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 MEN1O00255 615 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 JAK1P23458 1154 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 PHEXP78562 749 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 DCDP81605 110 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 RBBP7Q16576 425 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 NDUFA9Q16795 377 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 DEFB110Q30KQ9 67 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 PDCD4Q53EL6 469 aaKnown RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 CLEC6AQ6EIG7 209 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 CT55Q8WUE5 264 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 RERGQ96A58 199 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ERP27Q96DN0 273 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 C17orf62Q9BQA9 187 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 AIG1Q9NVV5 245 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 ANGPTL2Q9UKU9 493 aa7.82□□□□□ -1.16
CDC42SE2-208ENST00000505065 FAM149AA5PLN7 773 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 WASHC1A8K0Z3 465 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLC22A2O15244 555 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 GUSBP08236 651 aa7.81□□□□□ -1.16
CDC42SE2-208ENST00000505065 F8A1P23610 371 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms