RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 CLIC1O00299 241 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 OPN1LWP04000 364 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 TNK1Q13470 666 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ITPK1Q13572 414 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 LASP1Q14847 261 aaKnown RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 FAM214AQ32MH5 1076 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 YIF1BQ5BJH7 314 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ZNF613Q6PF04 617 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CHRDL2Q6WN34 429 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 COMMD2Q86X83 199 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MOCOSQ96EN8 888 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 WDFY2Q96P53 400 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 DERL2Q9GZP9 239 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 UBQLN3Q9H347 655 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 AKT3Q9Y243 479 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 SLC22A31A6NKX4 558 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CDK14O94921 469 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 HIST1H2ABP04908 130 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ATP5IP56385 69 aaPredicted RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 GPR85P60893 370 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 RIPPLY2Q5TAB7 128 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 HIST3H2AQ7L7L0 130 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 DDX53Q86TM3 631 aaKnown RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ARMC10Q8N2F6 343 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ZNF615Q8N8J6 731 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 C3orf58Q8NDZ4 430 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 OR5W2Q8NH69 310 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 HIST1H2ACQ93077 130 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 WNT8BQ93098 351 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PKP2Q99959 881 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PCDHGA8Q9Y5G5 932 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ISM1B1AKI9 464 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 AK1P00568 194 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 HPGDP15428 266 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CDC25CP30307 473 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 XKP51811 444 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MBTD1Q05BQ5 628 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 QRICH1Q2TAL8 776 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 HBMQ6B0K9 141 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CES5AQ6NT32 575 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 REEP3Q6NUK4 255 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 GCNT7Q6ZNI0 430 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CATSPERGQ6ZRH7 1159 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ARHGAP12Q8IWW6 846 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 KIAA1958Q8N8K9 716 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PROKR2Q8NFJ6 384 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CDC26Q8NHZ8 85 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ARL6Q9H0F7 186 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ATG5Q9H1Y0 275 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 TFR2Q9UP52 801 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 KIAA0513O60268 411 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 S100A11P31949 105 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PTGER3P43115 390 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CREB5Q02930 508 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 BTG3Q14201 252 aaPredicted RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 GOLGA7BQ2TAP0 167 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 LRRC71Q8N4P6 559 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PCDH20Q8N6Y1 951 aaKnown RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 KDF1Q8NAX2 398 aaPredicted RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 IPMKQ8NFU5 416 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ASPNQ9BXN1 380 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 DPH1Q9BZG8 443 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 SCUBE2Q9NQ36 999 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MYO18AQ92614 2054 aaKnown RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 C2orf92A0A1B0GVN3 265 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MEIS3P1A6NDR6 274 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 hCG_2039718K7EN88 272 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 AIPO00170 330 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PHOX2AO14813 284 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PPM1BO75688 479 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ABLIM3O94929 683 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MAKP20794 623 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 TMEM115Q12893 351 aaPredicted RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 SLC25A52Q3SY17 297 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 CDONQ4KMG0 1287 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 TCTE1Q5JU00 501 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ZER1Q7Z7L7 766 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 SLC7A5P1Q8MH63 180 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PTGR2Q8N8N7 351 aaPredicted RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 AVL9Q8NBF6 648 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 OR13D1Q8NGV5 346 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 TMEM159Q96B96 161 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MOGAT1Q96PD6 335 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MYEF2Q9P2K5 600 aaKnown RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 FAM96BQ9Y3D0 163 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 NPFFR2Q9Y5X5 522 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 A0A087WWV3 80 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 MOXD2PA6NHM9 499 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ARNTLO00327 626 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 B4GALT4O60513 344 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 ABHD16AO95870 558 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 PTPN1P18031 435 aaKnown RBP5.88□□□□□ -1.47
LINC02397-201ENST00000504409 GCSHP23434 173 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 DSG3P32926 999 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 TAS2R41P59536 307 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 TMEM132BQ14DG7 1078 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 DPYSL2Q16555 572 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 FBXO48Q5FWF7 155 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 DESI1Q6ICB0 168 aa5.88□□□□□ -1.47
LINC02397-201ENST00000504409 USP17L2Q6R6M4 530 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms