RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GASTP01350 101 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 GLULP15104 373 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 RHOQP17081 205 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 SOX9P48436 509 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 RPIAP49247 311 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 TTPAP49638 278 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 GZMMP51124 257 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF140P52738 457 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-208ENST00000504387 RPA4Q13156 261 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 SPHARQ15513 63 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 STK11Q15831 433 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 DUSP7Q16829 419 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 TOR1AIP1Q5JTV8 583 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 HS6ST3Q8IZP7 471 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 GPR150Q8NGU9 434 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 NFKBIDQ8NI38 313 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 FCGR1BQ92637 280 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 TTLL2Q9BWV7 592 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 KCNH6Q9H252 994 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 NDUFAF4Q9P032 175 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 GPR52Q9Y2T5 361 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 PCDHGB3Q9Y5G1 929 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 PLXNA1Q9UIW2 1896 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 LCTP09848 1927 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 PIPSLA2A3N6 862 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 SLC28A1O00337 649 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 CASKO14936 926 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 INSIG1O15503 277 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 TLX2O43763 284 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-208ENST00000504387 PRLP01236 227 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 KRT6AP02538 564 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 KRT6BP04259 564 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF865P0CJ78 1059 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-208ENST00000504387 PRKACAP17612 351 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 CRYBA2P53672 197 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ABATP80404 500 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 MC1RQ01726 317 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ZSWIM7Q19AV6 140 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.32□□□□□ -1.244e-7■■□□□ 12
NEDD9-208ENST00000504387 IQCCQ4KMZ1 466 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ATAT1Q5SQI0 421 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 BCL2L15Q5TBC7 163 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ANKRD54Q6NXT1 300 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 RFLNAQ6ZTI6 216 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 LIMS2Q7Z4I7 341 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ATCAYQ86WG3 371 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 UMODL1-AS1Q8N2C9 162 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 LSMEM1Q8N8F7 131 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 GALNT6Q8NCL4 622 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 GALNT11Q8NCW6 608 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 PIGKQ92643 395 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 EID2BQ96D98 161 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 TMED9Q9BVK6 235 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 CD244Q9BZW8 370 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 MS4A7Q9GZW8 240 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-208ENST00000504387 KATNBL1Q9H079 304 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 MAGIXQ9H6Y5 334 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ING3Q9NXR8 418 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 GLTPQ9NZD2 209 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 CD84Q9UIB8 345 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 CRLS1Q9UJA2 301 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 TMCC3Q9ULS5 477 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 MGAT4AQ9UM21 535 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 SCML1Q9UN30 329 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 SSR3Q9UNL2 185 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 RWDD3Q9Y3V2 267 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 ZFP37Q9Y6Q3 630 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-208ENST00000504387 DOCK1Q14185 1865 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 DOCK3Q8IZD9 2030 aa7.32□□□□□ -1.24
NEDD9-208ENST00000504387 PRAMEF33A0A0G2JMD5 474 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 C2orf78A6NCI8 922 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ANKRD66B4E2M5 251 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PRRG1O14668 218 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 WNT9AO14904 365 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PRAMEF10O60809 474 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CSO75390 466 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CLDN9O95484 217 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 TRBC1P01850 177 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PDGFAP04085 211 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 RHOCP08134 193 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 GZMKP49863 264 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 SGSHP51688 502 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CDC42P60953 191 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 PSPHP78330 225 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 KCNJ10P78508 379 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 TUSC3Q13454 348 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 GAB1Q13480 694 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 SUZ12Q15022 739 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 LARS2Q15031 903 aaKnown RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 KIAA1841Q6NSI8 718 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 NOXRED1Q6NXP6 359 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 ADAMTSL2Q86TH1 951 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 LHFPL3Q86UP9 236 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CALHM3Q86XJ0 350 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 C2orf73Q8N5S3 287 aaPredicted RBP7.31□□□□□ -1.24
NEDD9-208ENST00000504387 OR4M2Q8NGB6 313 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 OR52P1PQ8NH57 321 aa7.31□□□□□ -1.24
NEDD9-208ENST00000504387 CEP76Q8TAP6 659 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms