RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 AGAP4Q96P64 663 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PANX1Q96RD7 426 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LMF1Q96S06 567 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GINS4Q9BRT9 223 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TTYH2Q9BSA4 534 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PTDSS2Q9BVG9 487 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF416Q9BWM5 594 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLIRPQ9GZT3 109 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ADAMTS10Q9H324 1103 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 KLHL31Q9H511 634 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 COQ10BQ9H8M1 238 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 XPNPEP1Q9NQW7 623 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 POLR3BQ9NW08 1133 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CDH22Q9UJ99 828 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 C3orf18Q9UK00 162 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIP11Q15643 1979 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZMYM2Q9UBW7 1377 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CITO14578 2027 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LCTP09848 1927 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 C17orf102A2RUQ5 167 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LOC110117498-PIK3R3F6TDL0 507 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 J3KRW8 73 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 BTN3A3O00478 584 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LRCH4O75427 683 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OPN1MWP04001 364 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OPN1MW2P0DN77 364 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OPN1MW3P0DN78 364 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF7P17097 686 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TNNI3P19429 210 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 YWHAQP27348 245 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GMPRP36959 345 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PNPLA4P41247 253 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PTGER3P43115 390 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 WNT3AP56704 352 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SNRPFP62306 86 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FZD5Q13467 585 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NAB1Q13506 487 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OLIG2Q13516 323 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TRA2AQ13595 282 aaKnown RBP eCLIP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF169Q14929 603 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 YOD1Q5VVQ6 348 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GLYATQ6IB77 296 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TIGD7Q6NT04 549 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIM40Q6P9F5 258 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CXCL17Q6UXB2 119 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SNX20Q7Z614 316 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TAC4Q86UU9 113 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PTOV1Q86YD1 416 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TMC8Q8IU68 726 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DENND6AQ8IWF6 608 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NAGSQ8N159 534 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RASGEF1CQ8N431 466 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TBC1D19Q8N5T2 526 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF557Q8N988 423 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LRRC57Q8N9N7 239 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM83FQ8NEG4 500 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 REPS2Q8NFH8 660 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 STAG3L4Q8TBR4 150 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TIFAQ96CG3 184 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 APOLD1Q96LR9 279 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OR52E6Q96RD3 313 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 BBS4Q96RK4 519 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 AGAP2Q99490 1192 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 BARD1Q99728 777 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 HSD17B14Q9BPX1 270 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF251Q9BRH9 671 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OSBPL11Q9BXB4 747 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CYP3A43Q9HB55 503 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PNPLA3Q9NST1 481 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TRHDEQ9UKU6 1024 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF214Q9UL59 606 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 POMPQ9Y244 141 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 YARS2Q9Y2Z4 477 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RAP2CQ9Y3L5 183 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DYRK1BQ9Y463 629 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SEC16AO15027 2179 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PRSS51A0A1B0GVH4 220 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM240BA0A1B0GVZ2 78 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A1B0GW55 424 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TCRBV7S3A2A0A539 114 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM234BA2RU67 622 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CCDC182A6NF36 153 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NDUFS8O00217 210 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TSPAN4O14817 238 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 AZIN1O14977 448 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 BCAT2O15382 392 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TYROBPO43914 113 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GMFGO60234 142 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CACNG3O60359 315 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 XYLBO75191 536 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM127O75204 238 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 H6PDO95479 791 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MPC2O95563 127 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SERPINA1P01009 418 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CDK1P06493 297 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CFHP08603 1231 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OR4Q2P0C623 313 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DUX4L2P0CJ85 424 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DUX4L3P0CJ86 424 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms