RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZNF441Q8N8Z8 693 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 OR9A1PQ8NGU1 263 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 VMP1Q96GC9 406 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 WFIKKN1Q96NZ8 548 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 PRAP1Q96NZ9 151 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 ALS2CR12Q96Q35 445 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 RBSNQ9H1K0 784 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 PIH1D1Q9NWS0 290 aaKnown RBP11.52□□□□□ -0.57
LSM6-204ENST00000504181 ZNF226Q9NYT6 803 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 WIF1Q9Y5W5 379 aa11.52□□□□□ -0.57
LSM6-204ENST00000504181 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
LSM6-204ENST00000504181 CHST10O43529 356 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 GPRIN2O60269 458 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 ZFAND5O76080 213 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 B3GALT4O96024 378 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 TNNT1P13805 278 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 CRYGSP22914 178 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 RBL1P28749 1068 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 CPOXP36551 454 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 PIGAP37287 484 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 MC3RP41968 323 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 RPS15AP62244 130 aaKnown RBP11.51□□□□□ -0.57
LSM6-204ENST00000504181 OCRLQ01968 901 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 CRYZQ08257 329 aaKnown RBP11.51□□□□□ -0.57
LSM6-204ENST00000504181 C12orf54Q6X4T0 127 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 BTLAQ7Z6A9 289 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 C9orf106Q8NAJ2 232 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 CAMKVQ8NCB2 501 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
LSM6-204ENST00000504181 SLC22A8Q8TCC7 542 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 P3H4Q92791 437 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 TTC1Q99614 292 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 EBNA1BP2Q99848 306 aaKnown RBP11.51□□□□□ -0.57
LSM6-204ENST00000504181 ARNT2Q9HBZ2 717 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
LSM6-204ENST00000504181 IGKV3D-11A0A0A0MRZ8 115 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 A0A0G2JK05 382 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 SMAPO00193 183 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 EGR1P18146 543 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 THBS2P35442 1172 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 PNLIPRP1P54315 467 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 ABATP80404 500 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 DUSP8Q13202 625 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 SEMA3AQ14563 771 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 NFKBIBQ15653 356 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 ANKRD20A4Q4UJ75 823 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 ANKRD20A2Q5SQ80 823 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 THEMIS2Q5TEJ8 643 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 ANKRD20A1Q5TYW2 823 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 HECTD2Q5U5R9 776 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 ANKRD20A3Q5VUR7 823 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 APTXQ7Z2E3 356 aaKnown RBP11.5□□□□□ -0.57
LSM6-204ENST00000504181 RASGEF1CQ8N431 466 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 GOLM1Q8NBJ4 401 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 TM4SF19Q96DZ7 209 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 TIMP4Q99727 224 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 MED18Q9BUE0 208 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 SHARPINQ9H0F6 387 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 PNO1Q9NRX1 252 aaKnown RBP11.5□□□□□ -0.57
LSM6-204ENST00000504181 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 MYOTQ9UBF9 498 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 LPAR3Q9UBY5 353 aa11.5□□□□□ -0.57
LSM6-204ENST00000504181 FEZ2Q9UHY8 353 aaPredicted RBP11.5□□□□□ -0.57
LSM6-204ENST00000504181 A0A087X0T9 212 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 CD8B2A6NJW9 211 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 GOT2P00505 430 aaKnown RBP11.49□□□□□ -0.57
LSM6-204ENST00000504181 FAM228BP0C875 321 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 LOXP28300 417 aaPredicted RBP11.49□□□□□ -0.57
LSM6-204ENST00000504181 IDUAP35475 653 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 ACVR1BP36896 505 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 COILP38432 576 aaPredicted RBP11.49□□□□□ -0.57
LSM6-204ENST00000504181 CDKN2BP42772 138 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 TFDP2Q14188 446 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 DEFB134Q4QY38 66 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 PTRHD1Q6GMV3 140 aaKnown RBP11.49□□□□□ -0.57
LSM6-204ENST00000504181 ASPGQ86U10 573 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 SLC13A3Q8WWT9 602 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 NTNG2Q96CW9 530 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 ZC3HAV1LQ96H79 300 aaKnown RBP11.49□□□□□ -0.57
LSM6-204ENST00000504181 PKP4Q99569 1192 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 SLC30A3Q99726 388 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 PRDM14Q9GZV8 571 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 ACKR4Q9NPB9 350 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 ZFATQ9P243 1243 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 UVRAGQ9P2Y5 699 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 SLC22A7Q9Y694 548 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 PRR14LQ5THK1 2151 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 NBEAL2Q6ZNJ1 2754 aa11.49□□□□□ -0.57
LSM6-204ENST00000504181 TRRAPQ9Y4A5 3859 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 KCNE1BA0A087WTH5 132 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 HACD1B0YJ81 288 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 H7C0C1 242 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 MYO1CO00159 1063 aa11.48□□□□□ -0.57
LSM6-204ENST00000504181 GALR3O60755 368 aaPredicted RBP11.48□□□□□ -0.57
LSM6-204ENST00000504181 ZNF354AO60765 605 aaPredicted RBP11.48□□□□□ -0.57
LSM6-204ENST00000504181 SLC35G6P0C7Q6 338 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms