RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CEP97Q8IW35 865 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 C17orf62Q9BQA9 187 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 TUBA1CQ9BQE3 449 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 C5orf51A6NDU8 294 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 IFI30P13284 250 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 OC90Q02509 493 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 FADDQ13158 208 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 ITPRIPL2Q3MIP1 535 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 TMEM164Q5U3C3 297 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 SHQ1Q6PI26 577 aaKnown RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 PHOSPHO1Q8TCT1 267 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 POF1BQ8WVV4 589 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 RELTQ969Z4 430 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 LATS1O95835 1130 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 HPRP00739 348 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 SLC6A9P48067 706 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 MAZP56270 477 aaKnown RBP15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 PRAMEF17Q5VTA0 474 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 NRROSQ86YC3 692 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 ANKFN1Q8N957 763 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 OR4K17Q8NGC6 315 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 OR4K14Q8NGD5 310 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 MCCC2Q9HCC0 563 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 CCM2LQ9NUG4 571 aaPredicted RBP15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 FUT4P22083 530 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 ETV3P41162 512 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 DHPSP49366 369 aaPredicted RBP15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 KLHL26Q53HC5 615 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 GPRIN1Q7Z2K8 1008 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 TM9SF2Q99805 663 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 AIG1Q9NVV5 245 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 KLRF1Q9NZS2 232 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 IGKV6-21A0A0C4DH24 114 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 TSPAN6O43657 245 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 AHSA1O95433 338 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 PDYNP01213 254 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 MT-ND5P03915 603 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 GADD45AP24522 165 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF615Q8N8J6 731 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 NSUN5Q96P11 429 aaKnown RBP15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 MCHR1Q99705 422 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 H7BY64 318 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 LDB2O43679 373 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 ARRB1P49407 418 aaPredicted RBP15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 TCEANCQ8N8B7 351 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 PRAP1Q96NZ9 151 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 SLC30A2Q9BRI3 323 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 B3GAT2Q9NPZ5 323 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 FAM53CQ9NYF3 392 aa15.94■□□□□ 0.14
PCDHA1-203ENST00000504120 EEDO75530 441 aaKnown RBP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 PRH1P02810 166 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 PDHA2P29803 388 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 TIA1P31483 386 aaKnown RBP eCLIP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF829Q3KNS6 432 aaPredicted RBP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 OR10T2Q8NGX3 314 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 OR51I1Q9H343 314 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 GRHPRQ9UBQ7 328 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 NIPAL4Q0D2K0 466 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 GRB7Q14451 532 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 VMACQ2NL98 169 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 PRRT3Q5FWE3 981 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 DPY19L3Q6ZPD9 716 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 CDHR3Q6ZTQ4 885 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF227Q86WZ6 799 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 SCAMP4Q969E2 229 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 PNPLA2Q96AD5 504 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 NXPE2Q96DL1 559 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 CCDC115Q96NT0 180 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 DNAJC27Q9NZQ0 273 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 BAZ2AQ9UIF9 1905 aaKnown RBP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 WASHC1A8K0Z3 465 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 WASH3PC4AMC7 463 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 PLGP00747 810 aaPredicted RBP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 WASH2PQ6VEQ5 465 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 HACD2Q6Y1H2 254 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 TRIM74Q86UV6 250 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 THEM6Q8WUY1 208 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 RAB8BQ92930 207 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 GPR62Q9BZJ7 368 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 DZANK1Q9NVP4 752 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 RHCGQ9UBD6 479 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 C19orf25Q9UFG5 118 aaPredicted RBP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 SERTAD3Q9UJW9 196 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 GNG8Q9UK08 70 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 CMAHPQ9Y471 501 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 FDXRP22570 491 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 MEF2AQ02078 507 aaPredicted RBP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 CBFBQ13951 182 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 PTGR1Q14914 329 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF517Q6ZMY9 492 aaPredicted RBP15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF101Q8IZC7 436 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 LMX1AQ8TE12 382 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 DOHHQ9BU89 302 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 SEC61A2Q9H9S3 476 aa15.93■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF840PA6NDX5 716 aa15.92■□□□□ 0.14
PCDHA1-203ENST00000504120 RASAL1O95294 804 aa15.92■□□□□ 0.14
PCDHA1-203ENST00000504120 HTR1AP08908 422 aa15.92■□□□□ 0.14
PCDHA1-203ENST00000504120 JUPP14923 745 aa15.92■□□□□ 0.14
PCDHA1-203ENST00000504120 POU6F2P78424 691 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms