RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 SEC14L3Q9UDX4 400 aa18.23■□□□□ 0.51
UBE2D3-215ENST00000503418 RNF112Q9ULX5 631 aa18.23■□□□□ 0.51
UBE2D3-215ENST00000503418 TCRBV16S1A1N1A0A5B0 115 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 ANKDD1BA6NHY2 528 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 SAGE2PA6NJ88 616 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 ZG16O60844 167 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 FAM155BO75949 473 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 S100BP04271 92 aaPredicted RBP18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 GMPRP36959 345 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 ETF1P62495 437 aaKnown RBP18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 CAV1Q03135 178 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 SLMAPQ14BN4 828 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 GRTP1Q5TC63 336 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 SPINK14Q6IE38 97 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 SULT1C3Q6IMI6 304 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 RAPH1Q70E73 1250 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 CYS1Q717R9 158 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 ELP5Q8TE02 316 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 MS4A6EQ96DS6 147 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 PRM3Q9NNZ6 103 aa18.22■□□□□ 0.51
UBE2D3-215ENST00000503418 A0A088AWK7 358 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 IGKV3D-11A0A0A0MRZ8 115 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 LRIT2A6NDA9 550 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 CCNT2O60583 730 aaKnown RBP18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 STK16O75716 305 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 C1QAP02745 245 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 CD46P15529 392 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 ZNF10P21506 573 aaPredicted RBP18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 GSTM2P28161 218 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 EEF1DP29692 281 aaKnown RBP18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 STX2P32856 288 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 GGT5P36269 586 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 DCTP40126 519 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 MAGEA4P43358 317 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 PLA2G16P53816 162 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 RUNX2Q13950 521 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 TRADDQ15628 312 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 ZKSCAN8Q15776 578 aaPredicted RBP18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 PDK4Q16654 411 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 XKR6Q5GH73 641 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 CDKL4Q5MAI5 379 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 MYO7BQ6PIF6 2116 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 CMC1Q7Z7K0 106 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 RPS19BP1Q86WX3 136 aaKnown RBP18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 PDPRQ8NCN5 879 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 FBF1Q8TES7 1133 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 KIAA1191Q96A73 305 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 UBXN10Q96LJ8 280 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 PHACTR1Q9C0D0 580 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 PITHD1Q9GZP4 211 aaPredicted RBP18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 REXO4Q9GZR2 422 aaKnown RBP18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 NT5DC2Q9H857 520 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 MMACHCQ9Y4U1 282 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 PCDHGB6Q9Y5F9 930 aa18.21■□□□□ 0.51
UBE2D3-215ENST00000503418 CACNA1DQ01668 2161 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 TRGV8A0A0C4DH27 118 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 B3GALT2O43825 422 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 CLEC3AO75596 197 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 TPP2P29144 1249 aaPredicted RBP18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 RBPJQ06330 500 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 DOC2AQ14183 400 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 EFTUD2Q15029 972 aaKnown RBP eCLIP18.2■□□□□ 0.53e-8■■■■■ 31.7
UBE2D3-215ENST00000503418 ZRSR2Q15696 482 aaKnown RBP18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 ADNP2Q6IQ32 1131 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 TRIM40Q6P9F5 258 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 ZDHHC24Q6UX98 284 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 LGI4Q8N135 537 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 HORMAD2Q8N7B1 307 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 FAM47BQ8NA70 645 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 TMEM178AQ8NBL3 297 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 PTCD3Q96EY7 689 aaKnown RBP18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 SCMH1Q96GD3 660 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 NPLQ9BXD5 320 aaPredicted RBP18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 EHD1Q9H4M9 534 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 ALG9Q9H6U8 611 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 COPS7BQ9H9Q2 264 aaPredicted RBP18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 LRFN1Q9P244 771 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 COPG2Q9UBF2 871 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 SH3BGRL2Q9UJC5 107 aa18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 PTBP2Q9UKA9 531 aaKnown RBP18.2■□□□□ 0.5
UBE2D3-215ENST00000503418 PRAMEF4O60810 478 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 MYO1DO94832 1006 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 TFEBP19484 476 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 HPDP32754 393 aaPredicted RBP18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 RAB38P57729 211 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 ZNF468Q5VIY5 522 aaPredicted RBP18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 PRAMEF9Q5VWM5 478 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 GALNTL5Q7Z4T8 443 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 VN1R5Q7Z5H4 357 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 TBC1D1Q86TI0 1168 aaPredicted RBP18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 FAM98AQ8NCA5 519 aaKnown RBP18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 OR2L5Q8NG80 312 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 SEC16BQ96JE7 1060 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 EFCAB11Q9BUY7 163 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 DEFB126Q9BYW3 111 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 PRTFDC1Q9NRG1 225 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 PNO1Q9NRX1 252 aaKnown RBP18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 UNC79Q9P2D8 2635 aa18.19■□□□□ 0.5
UBE2D3-215ENST00000503418 SUPT3HB4E1H0 165 aa18.18■□□□□ 0.5
UBE2D3-215ENST00000503418 CLDN4O14493 209 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms