RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SEMA4BQ9NPR2 832 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 DMRT3Q9NQL9 472 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 PSD3Q9NYI0 1048 aa17.2■□□□□ 0.34
PDLIM7-209ENST00000503346 A0A0G2JN53 185 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 C1QL1O75973 258 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 OTCP00480 354 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 TGFB1P01137 390 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 FHP07954 510 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 C8orf89P0DMQ9 161 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 RNH1P13489 461 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 RHAGQ02094 409 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 CLCQ05315 142 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 AIMP2Q13155 320 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 ZRSR2Q15696 482 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 C10orf62Q5T681 223 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 DEPDC1Q5TB30 811 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 KHDRBS2Q5VWX1 349 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 TCTN3Q6NUS6 607 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 CHSY3Q70JA7 882 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 RPS27LQ71UM5 84 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 UBE3DQ7Z6J8 389 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 MILR1Q7Z6M3 343 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 PLPP5Q8NEB5 264 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 OR4F6Q8NGB9 312 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 RDH11Q8TC12 318 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 PPP4R1Q8TF05 950 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 C8orf44Q96CB5 159 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 SERINC2Q96SA4 455 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 TBCDQ9BTW9 1192 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 RBCK1Q9BYM8 510 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 ROGDIQ9GZN7 287 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 ATP13A2Q9NQ11 1180 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 PRDM7Q9NQW5 492 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 PPT2Q9UMR5 302 aa17.19■□□□□ 0.34
PDLIM7-209ENST00000503346 A0A1B0GTL3 188 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 FOXE1O00358 373 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 PPP6CO00743 305 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 B3GALT2O43825 422 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 SUPT7LO94864 414 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 HPP00738 406 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 PRB1P04280 392 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 MYL2P10916 166 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 COX6A1P12074 109 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 JAK1P23458 1154 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 ARL1P40616 181 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 MTTPP55157 894 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 PHEXP78562 749 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF844Q08AG5 666 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 DDX39BQ13838 428 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 RUNX2Q13950 521 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 MFSD4BQ5TF39 518 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 RNF175Q8N4F7 328 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 BANPQ8N9N5 519 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 FDCSPQ8NFU4 85 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 MYRIPQ8NFW9 859 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 TRPC4APQ8TEL6 797 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 METTL21AQ8WXB1 218 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 APOPT1Q96IL0 206 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 MTERF1Q99551 399 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 SLC25A23Q9BV35 468 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 OR51B5Q9H339 312 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 TRPS1Q9UHF7 1281 aa17.18■□□□□ 0.34
PDLIM7-209ENST00000503346 IGHV1-45A0A0A0MS14 117 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 OR2W5A6NFC9 320 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 MAGEB17A8MXT2 336 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 MASP2O00187 686 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 PSMD12O00232 456 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 CDC123O75794 336 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 SCELO95171 688 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 MLYCDO95822 493 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 TSPAN8P19075 237 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 PTX3P26022 381 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 CERS1P27544 350 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 ARFIP1P53367 373 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 DNAJB13P59910 316 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 RPS13P62277 151 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 LACTB2Q53H82 288 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 FRG2Q64ET8 278 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 FAAH2Q6GMR7 532 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 LETMD1Q6P1Q0 360 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF793Q6ZN11 406 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 NDUFAF7Q7L592 441 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 SRRM1Q8IYB3 904 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 GALNT16Q8N428 558 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF843Q8N446 348 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 ADAMTS18Q8TE60 1221 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 FRG2BQ96QU4 278 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF382Q96SR6 550 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 CENPKQ9BS16 269 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF700Q9H0M5 742 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 C12orf65Q9H3J6 166 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 COPS7BQ9H9Q2 264 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 PRM3Q9NNZ6 103 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 C19orf25Q9UFG5 118 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 MID2Q9UJV3 735 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF225Q9UK10 706 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 G3BP2Q9UN86 482 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 TP53TG5Q9Y2B4 290 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 STK38LQ9Y2H1 464 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms