RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 LRRC39Q96DD0 335 aa10.05□□□□□ -0.8
SNCA-207ENST00000502987 SCMH1Q96GD3 660 aa10.05□□□□□ -0.8
SNCA-207ENST00000502987 PDLIM5Q96HC4 596 aaKnown RBP10.05□□□□□ -0.8
SNCA-207ENST00000502987 VPS39Q96JC1 886 aa10.05□□□□□ -0.8
SNCA-207ENST00000502987 SARGQ9BW04 601 aa10.05□□□□□ -0.8
SNCA-207ENST00000502987 KLHL31Q9H511 634 aa10.05□□□□□ -0.8
SNCA-207ENST00000502987 PNO1Q9NRX1 252 aaKnown RBP10.05□□□□□ -0.8
SNCA-207ENST00000502987 CTNNAL1Q9UBT7 734 aa10.05□□□□□ -0.8
SNCA-207ENST00000502987 FBXW2Q9UKT8 454 aa10.05□□□□□ -0.8
SNCA-207ENST00000502987 A0A0G2JN53 185 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 TRBV11-1A0A0K0K1C0 115 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 FAM95CA0A1B0GW59 222 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 NCF1BA6NI72 391 aaPredicted RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 SAGE2PA6NJ88 616 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 NCF1CA8MVU1 366 aaPredicted RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 PRRG2O14669 202 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 CLGNO14967 610 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 NEURL1O76050 574 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 SERPINA6P08185 405 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 NCF1P14598 390 aaPredicted RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 ZNF24P17028 368 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 GNAZP19086 355 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 ELAVL4P26378 380 aaKnown RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 STXBP1P61764 594 aaKnown RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 REEP5Q00765 189 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 PDIA2Q13087 525 aaKnown RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 ZNF460Q14592 562 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 ZNF630Q2M218 657 aaPredicted RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 ZNF468Q5VIY5 522 aaPredicted RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 SBSNQ6UWP8 590 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 LGI4Q8N135 537 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 GHDCQ8N2G8 530 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 TMEM156Q8N614 296 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 CPSF7Q8N684 471 aaKnown RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 FBXO36Q8NEA4 188 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 FRMD6Q96NE9 622 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 CCDC77Q9BR77 488 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 TRIM51Q9BSJ1 452 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 CLK4Q9HAZ1 481 aaKnown RBP10.04□□□□□ -0.8
SNCA-207ENST00000502987 NECTIN3Q9NQS3 549 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 IKZF3Q9UKT9 509 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 TEX264Q9Y6I9 313 aa10.04□□□□□ -0.8
SNCA-207ENST00000502987 A0A088AWK7 358 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 CTAGE15A4D2H0 777 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ASPDHA6ND91 283 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ANKDD1BA6NHY2 528 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 KLRC4-KLRK1H3BQV0 150 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 CLDN4O14493 209 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 TFECO14948 347 aaPredicted RBP10.03□□□□□ -0.8
SNCA-207ENST00000502987 CDC40O60508 579 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNCA-207ENST00000502987 MYO1DO94832 1006 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 C1GALT1C1LP0DN25 315 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ZNF37AP17032 561 aaPredicted RBP10.03□□□□□ -0.8
SNCA-207ENST00000502987 ZNF10P21506 573 aaPredicted RBP10.03□□□□□ -0.8
SNCA-207ENST00000502987 IVDP26440 423 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 RFC3P40938 356 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 GDF5P43026 501 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 PAFAH1B1P43034 410 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 HNMTP50135 292 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 HLCSP50747 726 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 CLCN2P51788 898 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 MLF1P58340 268 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 GNG11P61952 73 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ADORA2A-AS1P86434 159 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 HSF1Q00613 529 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 SLC13A2Q13183 592 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 TSNQ15631 228 aaKnown RBP10.03□□□□□ -0.8
SNCA-207ENST00000502987 C18orf21Q32NC0 220 aaPredicted RBP10.03□□□□□ -0.8
SNCA-207ENST00000502987 TMIGD1Q6UXZ0 262 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 C3P1Q6ZMU1 363 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ADAMTSL2Q86TH1 951 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 CTAGE6Q86UF2 777 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 KRT78Q8N1N4 520 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 CA13Q8N1Q1 262 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ADAMTS18Q8TE60 1221 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 AGAP11Q8TF27 550 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 SLCO2A1Q92959 643 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 MTFMTQ96DP5 389 aaKnown RBP10.03□□□□□ -0.8
SNCA-207ENST00000502987 PDLIM2Q96JY6 352 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 PRTFDC1Q9NRG1 225 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 NSMCE4AQ9NXX6 385 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 TXNDC16Q9P2K2 825 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ERVK-11Q9UQG0 969 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 ZNF835Q9Y2P0 537 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 KLF13Q9Y2Y9 288 aaPredicted RBP10.03□□□□□ -0.8
SNCA-207ENST00000502987 MEMO1Q9Y316 297 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 OARD1Q9Y530 152 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 PSAT1Q9Y617 370 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 PKDREJQ9NTG1 2253 aa10.03□□□□□ -0.8
SNCA-207ENST00000502987 TCRBV16S1A1N1A0A5B0 115 aa10.02□□□□□ -0.81
SNCA-207ENST00000502987 EFCAB8A8MWE9 144 aa10.02□□□□□ -0.81
SNCA-207ENST00000502987 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
SNCA-207ENST00000502987 ERI3O43414 337 aaKnown RBP10.02□□□□□ -0.81
SNCA-207ENST00000502987 B3GALT2O43825 422 aa10.02□□□□□ -0.81
SNCA-207ENST00000502987 NME2P1O60361 137 aa10.02□□□□□ -0.81
SNCA-207ENST00000502987 CLDN14O95500 239 aa10.02□□□□□ -0.81
SNCA-207ENST00000502987 IFNA16P05015 189 aa10.02□□□□□ -0.81
SNCA-207ENST00000502987 SMIM10L1P0DMW3 83 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms