RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 TNFRSF10AO00220 468 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 B4GAT1O43505 415 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 KCNJ13O60928 360 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 SH3BGRLO75368 114 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 NTRK1P04629 796 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 KLK1P06870 262 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 ANXA8P13928 327 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 IL12RB1P42701 662 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 CTBSQ01459 385 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 IL1RL1Q01638 556 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 CNTN1Q12860 1018 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 NFATC3Q12968 1075 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 PPP1R8Q12972 351 aaKnown RBP11.46□□□□□ -0.57
NUP54-202ENST00000502850 HEPACAMQ14CZ8 416 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 SF1Q15637 639 aaKnown RBP11.46□□□□□ -0.57
NUP54-202ENST00000502850 ZNF385BQ569K4 471 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 CRB2Q5IJ48 1285 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 PIP5KL1Q5T9C9 394 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 METRNLQ641Q3 311 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 TMC5Q6UXY8 1006 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 GALNT5Q7Z7M9 940 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 FAM129CQ86XR2 697 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 YAF2Q8IY57 180 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 NAGSQ8N159 534 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 WDR48Q8TAF3 677 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 GIPC3Q8TF64 312 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 RORBQ92753 470 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 HLA-CQ95604 372 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 BORCS5Q969J3 196 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 ZFYVE19Q96K21 471 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 CDCA3Q99618 268 aaPredicted RBP11.46□□□□□ -0.57
NUP54-202ENST00000502850 DUSP21Q9H596 190 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 PRSS16Q9NQE7 514 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 TBC1D23Q9NUY8 699 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 WARS2Q9UGM6 360 aaKnown RBP11.46□□□□□ -0.57
NUP54-202ENST00000502850 RAPGEFL1Q9UHV5 662 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 ADAM29Q9UKF5 820 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 EXO1Q9UQ84 846 aaKnown RBP11.46□□□□□ -0.57
NUP54-202ENST00000502850 SH2B3Q9UQQ2 575 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 POFUT2Q9Y2G5 429 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 REV3LO60673 3130 aa11.46□□□□□ -0.57
NUP54-202ENST00000502850 TNFRSF11BO00300 401 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 CAPN5O15484 640 aaPredicted RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 KDM1AO60341 852 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 PDE9AO76083 593 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 PCCBP05166 539 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 IL3P08700 152 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 ARAFP10398 606 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 DDCP20711 480 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 RRM2P31350 389 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 SOAT1P35610 550 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 POLR2IP36954 125 aaKnown RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 PXNP49023 591 aaPredicted RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 CLK3P49761 638 aaKnown RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 PLA2G16P53816 162 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 TRA2BP62995 288 aaKnown RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 CDK6Q00534 326 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 REEP5Q00765 189 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 DMPKQ09013 629 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 NPRL3Q12980 569 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 RUNX3Q13761 415 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 KHDRBS2Q5VWX1 349 aaKnown RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 FAM83HQ6ZRV2 1179 aaPredicted RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 FAM92BQ6ZTR7 304 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 GET4Q7L5D6 327 aaPredicted RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 NUDT13Q86X67 352 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 ANKRD13BQ86YJ7 626 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 ARMC8Q8IUR7 673 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 ABHD11Q8NFV4 315 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 TTLQ8NG68 377 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 OR4K1Q8NGD4 311 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 OR5AR1Q8NGP9 310 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 OR10Q1Q8NGQ4 319 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 OR5P2Q8WZ92 322 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 FCGR1BQ92637 280 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 PSD2Q9BQI7 771 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 MS4A8Q9BY19 250 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 CCDC90BQ9GZT6 254 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 EPS8L2Q9H6S3 715 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 RMI1Q9H9A7 625 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 PHPT1Q9NRX4 125 aaPredicted RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 ZSCAN32Q9NX65 697 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 ENPP5Q9UJA9 477 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 ERVK-11Q9UQG0 969 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 TDRKHQ9Y2W6 561 aaKnown RBP11.46□□□□□ -0.58
NUP54-202ENST00000502850 ZNF451Q9Y4E5 1061 aa11.46□□□□□ -0.58
NUP54-202ENST00000502850 A0A1W2PPW3 197 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 ARRDC5A6NEK1 342 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 RGS10O43665 173 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 MITFO75030 526 aaPredicted RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 NDUFS2O75306 463 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 KAT7O95251 611 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 APODP05090 189 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 HTR1AP08908 422 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 NUDT7P0C024 238 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 ETFAP13804 333 aa11.45□□□□□ -0.58
NUP54-202ENST00000502850 EFNA1P20827 205 aaPredicted RBP11.45□□□□□ -0.58
NUP54-202ENST00000502850 C5AR1P21730 350 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms