RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CDYLQ9Y232 598 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 PRELID1Q9Y255 219 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 PPIL1Q9Y3C6 166 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 GRIP1Q9Y3R0 1128 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 PCDHGB1Q9Y5G3 927 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 PCDHGA10Q9Y5H3 936 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 HEY1Q9Y5J3 304 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 ST14Q9Y5Y6 855 aa4.96□□□□□ -1.62
HTT-202ENST00000502820 HIVEP1P15822 2718 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 PNMA8CA0A1B0GUJ8 204 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 A0A1W2PQ67 120 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 NOTOA8MTQ0 251 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 EIF3FO00303 357 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 ZNF195O14628 629 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 CLOCKO15516 846 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 MFSD11O43934 449 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 FZD6O60353 706 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SCRG1O75711 98 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 UBXN7O94888 489 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SNX4O95219 450 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 VAPBO95292 243 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 RASAL1O95294 804 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 HSPA4LO95757 839 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 JUNP05412 331 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 KRT8P05787 483 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 STSP08842 583 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 HOXC4P09017 264 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 EBLN1P0CF75 366 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ACP5P13686 325 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 STMN1P16949 149 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ENDOUP21128 410 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 LPOP22079 712 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 LHCGRP22888 699 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 FASP25445 335 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 S100A5P33763 92 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 TRIM23P36406 574 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 GPR1P46091 355 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 MEOX1P50221 254 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 IST1P53990 364 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 CSE1LP55060 971 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 CASP6P55212 293 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 CDH6P55285 790 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 TAS2R40P59535 323 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 EIF3EP60228 445 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 CSNK1G2P78368 415 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 CDKL1Q00532 357 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 OTUD4Q01804 1114 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 BCL2L1Q07817 233 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 GALNT1Q10472 559 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 TRAF2Q12933 501 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 IL18R1Q13478 541 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SQSTM1Q13501 440 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 DSG2Q14126 1118 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 E2F2Q14209 437 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SQLEQ14534 574 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ZNF235Q14590 738 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 IHHQ14623 411 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 PCLAFQ15004 111 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 EFTUD2Q15029 972 aaKnown RBP eCLIP4.95□□□□□ -1.62
HTT-202ENST00000502820 PAFAH1B3Q15102 231 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 PDK1Q15118 436 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 RFX4Q33E94 735 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ATP13A4Q4VNC1 1196 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 AARS2Q5JTZ9 985 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 FNBP1LQ5T0N5 605 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ZFYVE27Q5T4F4 411 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 GRTP1Q5TC63 336 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 NDUFAF5Q5TEU4 345 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 PRAMEF17Q5VTA0 474 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 MLIPQ5VWP3 458 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 NCBP2-AS2Q69YL0 99 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SIGIRRQ6IA17 410 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 MFSD7Q6UXD7 560 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 CLEC9AQ6UXN8 241 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 LINC00696Q6ZRV3 163 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 KIAA0408Q6ZU52 694 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 CXXC5Q7LFL8 322 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 BPHLQ86WA6 291 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 PRIMA1Q86XR5 153 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ARMC8Q8IUR7 673 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ANKMY2Q8IV38 441 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 CLYBLQ8N0X4 340 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ZNF786Q8N393 782 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 GALNT16Q8N428 558 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SVOPQ8N4V2 548 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 DHRSXQ8N5I4 330 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ATPAF2Q8N5M1 289 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ZBTB2Q8N680 514 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 PQLC3Q8N755 202 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 PPM1NQ8N819 430 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SETD6Q8TBK2 473 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 ACTL9Q8TC94 416 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 FAR1Q8WVX9 515 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 HDAC2Q92769 488 aaKnown RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 CCDC126Q96EE4 140 aa4.95□□□□□ -1.62
HTT-202ENST00000502820 SCARF2Q96GP6 870 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 CENPNQ96H22 339 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 ZNF486Q96H40 463 aaPredicted RBP4.95□□□□□ -1.62
HTT-202ENST00000502820 MAELQ96JY0 434 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms