RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 KRT15P19012 456 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 SERPINB1P30740 379 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 HSD17B3P37058 310 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 CASRP41180 1078 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 CCNG1P51959 295 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 EFNA3P52797 238 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 MTTPP55157 894 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 AP2B1P63010 937 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 Q0VFX4 171 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 DDX39BQ13838 428 aaKnown RBP12.06□□□□□ -0.48
HSPG2-213ENST00000498495 RUNX2Q13950 521 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 PCOLCEQ15113 449 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
HSPG2-213ENST00000498495 ADPRMQ3LIE5 342 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 NADK2Q4G0N4 442 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 TMEM35AQ53FP2 167 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 COLEC12Q5KU26 742 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 ABHD17CQ6PCB6 329 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 ANKRD37Q7Z713 158 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 CA13Q8N1Q1 262 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 TMEM151AQ8N4L1 468 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 ZADH2Q8N4Q0 377 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 REPS1Q96D71 796 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 CMTM7Q96FZ5 175 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 SERINC2Q96SA4 455 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 MS4A8Q9BY19 250 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 MFRPQ9BY79 579 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 ROGDIQ9GZN7 287 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 COPS7BQ9H9Q2 264 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-213ENST00000498495 PRDM7Q9NQW5 492 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 LANCL2Q9NS86 450 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.06□□□□□ -0.48
HSPG2-213ENST00000498495 RNF11Q9Y3C5 154 aa12.06□□□□□ -0.48
HSPG2-213ENST00000498495 V9GYY5 206 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-213ENST00000498495 TLDC2A0PJX2 215 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 MAGEB17A8MXT2 336 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 FAM227AF5H4B4 570 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 H0YIV9 168 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 J3QKU1 62 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 OR7A17O14581 309 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 SERPINA7P05543 415 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 UQCRHP07919 91 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 SBK3P0C264 359 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 PRR35P0CG20 571 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 PIK3CBP42338 1070 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 BTG2P78543 158 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 PHEXP78562 749 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 RHAGQ02094 409 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 RCN2Q14257 317 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 ABRAXAS2Q15018 415 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 ERCC6LQ2NKX8 1250 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 AP5B1Q2VPB7 878 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 DEPDC1Q5TB30 811 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 WDR93Q6P2C0 686 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 IGFL3Q6UXB1 125 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 RIPOR1Q6ZS17 1223 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 LANCL3Q6ZV70 420 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 MILR1Q7Z6M3 343 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 TDRPQ86YL5 185 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 RBMXL3Q8N7X1 1067 aaKnown RBP12.05□□□□□ -0.48
HSPG2-213ENST00000498495 L3MBTL4Q8NA19 623 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 HUS1BQ8NHY5 278 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 PPP4R1Q8TF05 950 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 MZB1Q8WU39 189 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 IMMP1LQ96LU5 166 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 QRFPRQ96P65 431 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 KCNC2Q96PR1 638 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 CDK15Q96Q40 435 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 CENPKQ9BS16 269 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 TBCDQ9BTW9 1192 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 NTMT1Q9BV86 223 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 OR51B5Q9H339 312 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 SEMA4BQ9NPR2 832 aaPredicted RBP12.05□□□□□ -0.48
HSPG2-213ENST00000498495 PCTPQ9UKL6 214 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 TSC22D4Q9Y3Q8 395 aa12.05□□□□□ -0.48
HSPG2-213ENST00000498495 TNRC6AQ8NDV7 1962 aaKnown RBP12.05□□□□□ -0.48
HSPG2-213ENST00000498495 TTLL8A6PVC2 850 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 A8MT66 165 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 CLDN4O14493 209 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 CDH16O75309 829 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 SEC24DO94855 1032 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 SUPT7LO94864 414 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 PTX3P26022 381 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 CCT5P48643 541 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 CDH13P55290 713 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 RAB38P57729 211 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 OR4D2P58180 307 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 RPS13P62277 151 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 TLE1Q04724 770 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 RASA2Q15283 850 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 ZRSR2Q15696 482 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 BTBD16Q32M84 506 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 SFT2D3Q587I9 215 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 KHDRBS2Q5VWX1 349 aaKnown RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 TTC19Q6DKK2 380 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 JMJD6Q6NYC1 403 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-213ENST00000498495 EMBQ6PCB8 327 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 ISLR2Q6UXK2 745 aa12.04□□□□□ -0.48
HSPG2-213ENST00000498495 QSOX2Q6ZRP7 698 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms