RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 USP27XA6NNY8 438 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 KIR3DP1A8MWS1 328 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 TGFBR3LH3BV60 316 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 ZSCAN12O43309 604 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 MYO1DO94832 1006 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 RNH1P13489 461 aaKnown RBP14.96□□□□□ -0.01
MUC1-220ENST00000498431 PPP2R1BP30154 601 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 SCTRP47872 440 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 CDKN2DP55273 166 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 RGS1Q08116 209 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 MYBPHQ13203 477 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 HSP90AA5PQ58FG0 334 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 RBM20Q5T481 1227 aaKnown RBP14.96□□□□□ -0.01
MUC1-220ENST00000498431 TTC27Q6P3X3 843 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 ABHD13Q7L211 337 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 STRA8Q7Z7C7 330 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 MYO1HQ8N1T3 1032 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 B3GNT7Q8NFL0 401 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 NEIL2Q969S2 332 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 LINGO1Q96FE5 620 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 TSNARE1Q96NA8 513 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 SLC6A16Q9GZN6 736 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 LIN28AQ9H9Z2 209 aaKnown RBP14.96□□□□□ -0.01
MUC1-220ENST00000498431 IARS2Q9NSE4 1012 aaKnown RBP14.96□□□□□ -0.01
MUC1-220ENST00000498431 PNPLA3Q9NST1 481 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 KCNN3Q9UGI6 736 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 ZFP69BQ9UJL9 534 aa14.96□□□□□ -0.01
MUC1-220ENST00000498431 TMEM200CA6NKL6 621 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 FAM166BA8MTA8 275 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 NPIPA2E9PIF3 369 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 NPIPA3F8WFD2 350 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 SLC16A5O15375 505 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 KLK8O60259 260 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 KRT14P02533 472 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 SMIM10L1P0DMW3 83 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 MLNP12872 115 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 GABRB3P28472 473 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 CXCR5P32302 372 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 MAGEA3P43357 314 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 RGS4P49798 205 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 CLCN2P51788 898 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 SKP1P63208 163 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 GXYLT1Q4G148 440 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 CES4AQ5XG92 561 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 DUPD1Q68J44 220 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 LRRC8EQ6NSJ5 796 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 PALM2Q8IXS6 379 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 CA13Q8N1Q1 262 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 PSD4Q8NDX1 1056 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 OR5M9Q8NGP3 310 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 OR5M3Q8NGP4 307 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 CALML6Q8TD86 181 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 SREK1Q8WXA9 508 aaKnown RBP14.95□□□□□ -0.02
MUC1-220ENST00000498431 TRIM44Q96DX7 344 aaPredicted RBP14.95□□□□□ -0.02
MUC1-220ENST00000498431 SMIM10Q96HG1 83 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 SIGLEC10Q96LC7 697 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 LIME1Q9H400 295 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 PNO1Q9NRX1 252 aaKnown RBP14.95□□□□□ -0.02
MUC1-220ENST00000498431 ARL15Q9NXU5 204 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 PYCARDQ9ULZ3 195 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 CLDN16Q9Y5I7 305 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 LIPGQ9Y5X9 500 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 MAD1L1Q9Y6D9 718 aa14.95□□□□□ -0.02
MUC1-220ENST00000498431 EML6Q6ZMW3 1958 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 G3V3Y1 287 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 PSMD12O00232 456 aaPredicted RBP14.94□□□□□ -0.02
MUC1-220ENST00000498431 TUBB4AP04350 444 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 AHRP35869 848 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 SSR4P51571 173 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 GPR143P51810 404 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 DLX5P56178 289 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 PPIAP62937 165 aaKnown RBP14.94□□□□□ -0.02
MUC1-220ENST00000498431 REEP5Q00765 189 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 XKR6Q5GH73 641 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 UGT3A1Q6NUS8 523 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 NIPAL1Q6NVV3 410 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 KIAA0408Q6ZU52 694 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 LMNTD2Q8IXW0 634 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 C2CD4AQ8NCU7 369 aaPredicted RBP14.94□□□□□ -0.02
MUC1-220ENST00000498431 TMEM52Q8NDY8 209 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 MCUQ8NE86 351 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 MAIP1Q8WWC4 291 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 NCLNQ969V3 563 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 CXXC4Q9H2H0 198 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 ZDHHC11Q9H8X9 412 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 XAB2Q9HCS7 855 aaKnown RBP14.94□□□□□ -0.02
MUC1-220ENST00000498431 TIMMDC1Q9NPL8 285 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 LZTFL1Q9NQ48 299 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 CCM2LQ9NUG4 571 aaPredicted RBP14.94□□□□□ -0.02
MUC1-220ENST00000498431 TAS2R13Q9NYV9 303 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 IKZF3Q9UKT9 509 aa14.94□□□□□ -0.02
MUC1-220ENST00000498431 FLNAP21333 2647 aaKnown RBP14.94□□□□□ -0.02
MUC1-220ENST00000498431 OR6B1O95007 311 aa14.93□□□□□ -0.02
MUC1-220ENST00000498431 ZWINTO95229 277 aa14.93□□□□□ -0.02
MUC1-220ENST00000498431 GUCA1CO95843 209 aa14.93□□□□□ -0.02
MUC1-220ENST00000498431 HIST1H2AGP0C0S8 130 aaPredicted RBP14.93□□□□□ -0.02
MUC1-220ENST00000498431 HIST1H2ADP20671 130 aa14.93□□□□□ -0.02
MUC1-220ENST00000498431 HNRNPFP52597 415 aaKnown RBP14.93□□□□□ -0.02
MUC1-220ENST00000498431 SNTB1Q13884 538 aaKnown RBP14.93□□□□□ -0.02
MUC1-220ENST00000498431 CSHL1Q14406 222 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms