RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 PRSS42Q7Z5A4 293 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 TFAP2DQ7Z6R9 452 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 SYVN1Q86TM6 617 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 CUZD1Q86UP6 607 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 SLC47A2Q86VL8 602 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 VSIG1Q86XK7 387 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 BMPERQ8N8U9 685 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 ACRBPQ8NEB7 543 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 EXD1Q8NHP7 514 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 TEKT4Q8WW24 435 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 TM9SF4Q92544 642 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 AKAP1Q92667 903 aaKnown RBP eCLIP3.77□□□□□ -1.81
USP54-217ENST00000498213 TSACCQ96A04 125 aaPredicted RBP3.77□□□□□ -1.81
USP54-217ENST00000498213 DTD2Q96FN9 168 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 TRMT61AQ96FX7 289 aaKnown RBP3.77□□□□□ -1.81
USP54-217ENST00000498213 TRAPPC9Q96Q05 1148 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 NAA15Q9BXJ9 866 aaKnown RBP3.77□□□□□ -1.81
USP54-217ENST00000498213 FRMD8Q9BZ67 464 aaPredicted RBP3.77□□□□□ -1.81
USP54-217ENST00000498213 TM6SF2Q9BZW4 377 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 TRIM2Q9C040 744 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 NDST4Q9H3R1 872 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 LRRC19Q9H756 370 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 ZWILCHQ9H900 591 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 PDFQ9HBH1 243 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 ABHD10Q9NUJ1 306 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 GPR83Q9NYM4 423 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 MPP6Q9NZW5 540 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 TAAR2Q9P1P5 351 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 SEMA5BQ9P283 1151 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 DNAJC12Q9UKB3 198 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 MAN1B1Q9UKM7 699 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 SIRT4Q9Y6E7 314 aaPredicted RBP3.77□□□□□ -1.81
USP54-217ENST00000498213 ZGRF1Q86YA3 2104 aa3.77□□□□□ -1.81
USP54-217ENST00000498213 TRIM49BA6NDI0 452 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 B4DGG1 531 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 RASA4BC9J798 803 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 F8VZ95 297 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 I6L893 689 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 APOL1O14791 398 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 POLR1CO15160 346 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 RASA4O43374 803 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 JRKO75564 520 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 PALMO75781 387 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 CEACAM4O75871 244 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 HEXIM1O94992 359 aaKnown RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 CLDN14O95500 239 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 CRYABP02511 175 aaKnown RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 C9P02748 559 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 FGF1P05230 155 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 HBQ1P09105 142 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 PSG1P11464 419 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 FGF5P12034 268 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 GZMAP12544 262 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 UNGP13051 313 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 VCLP18206 1134 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 XRCC1P18887 633 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 DUSP1P28562 367 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 THBS4P35443 961 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 SPAM1P38567 509 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 USP8P40818 1118 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 HADHAP40939 763 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 PIK3CBP42338 1070 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 STT3AP46977 705 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 FOXG1P55316 489 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 PITX1P78337 314 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 ADORA2A-AS1P86434 159 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 CDK3Q00526 305 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 PDE1BQ01064 536 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 ACY1Q03154 408 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 CBFBQ13951 182 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 TAF5Q15542 800 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 TPD52L1Q16890 204 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 KRTAP24-1Q3LI83 254 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 CCDC14Q49A88 953 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 GLE1Q53GS7 698 aaKnown RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 BOLA3Q53S33 107 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.76□□□□□ -1.81
USP54-217ENST00000498213 LYPLAL1Q5VWZ2 237 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 PODNL1Q6PEZ8 512 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 FAM57BQ71RH2 274 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 SRLQ86TD4 932 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 FAM131BQ86XD5 332 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 GALNT13Q8IUC8 556 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 TXLNBQ8N3L3 684 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 MPLKIPQ8TAP9 179 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 GPT2Q8TD30 523 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 BRSK1Q8TDC3 778 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 FAR1Q8WVX9 515 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 NUS1Q96E22 293 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 PDXPQ96GD0 296 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 ELMO2Q96JJ3 720 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 CFAP57Q96MR6 1250 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 OR2M4Q96R27 311 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 NUDCD1Q96RS6 583 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 MGME1Q9BQP7 344 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 ZNF559Q9BR84 538 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 TUBB6Q9BUF5 446 aa3.76□□□□□ -1.81
USP54-217ENST00000498213 TM2D2Q9BX73 214 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms