RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 METTL4Q8N3J2 472 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 FNDC5Q8NAU1 212 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 RFWD2Q8NHY2 731 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-227ENST00000498056 MVB12AQ96EY5 273 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 APIPQ96GX9 242 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 PPP3R2Q96LZ3 170 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-227ENST00000498056 CCT7Q99832 543 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 C1orf50Q9BV19 199 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 RBCK1Q9BYM8 510 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 ROGDIQ9GZN7 287 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 RABEP2Q9H5N1 569 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 WDR55Q9H6Y2 383 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-227ENST00000498056 ENAMQ9NRM1 1142 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 C1orf109Q9NX04 203 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 AHSPQ9NZD4 102 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 NEUROG3Q9Y4Z2 214 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
CPNE1-227ENST00000498056 GNG14A0A1W2PPG7 69 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 FOXS1O43638 330 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 SEC22BO75396 215 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 EEDO75530 441 aaKnown RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 MYO1DO94832 1006 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 DLGAP3O95886 979 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 ADRB1P08588 477 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 ALOX15P16050 662 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 ATP5A1P25705 553 aaKnown RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 RORAP35398 523 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 OR1D4P47884 311 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 MTTPP55157 894 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 MAT1AQ00266 395 aaKnown RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 TBL3Q12788 808 aaKnown RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 FAM53BQ14153 422 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 SYT16Q17RD7 645 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 SLC9B1Q4ZJI4 515 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 OR4C11Q6IEV9 310 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 CGB2Q6NT52 195 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 NIPAL1Q6NVV3 410 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 PRMT9Q6P2P2 845 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 CYP20A1Q6UW02 462 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 Q6ZSR9 355 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 ACAD11Q709F0 780 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 PAGE2Q7Z2X7 111 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 UBE3DQ7Z6J8 389 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 MTERF4Q7Z6M4 381 aaKnown RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 ZFAND4Q86XD8 727 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 SLC38A9Q8NBW4 561 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 OR5T3Q8NGG3 340 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 MR1Q95460 341 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 COL26A1Q96A83 441 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 GBP5Q96PP8 586 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 SERINC2Q96SA4 455 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 EBF4Q9BQW3 602 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 YIPF2Q9BWQ6 316 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 TMEM120AQ9BXJ8 343 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 ZNF717Q9BY31 904 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-227ENST00000498056 ASCL3Q9NQ33 180 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 LHX9Q9NQ69 397 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 THSD1Q9NS62 852 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 PSD3Q9NYI0 1048 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 CDC14AQ9UNH5 594 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 CCL27Q9Y4X3 112 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 AHCTF1Q8WYP5 2266 aa12.86□□□□□ -0.35
CPNE1-227ENST00000498056 CDRT15L2A8MXV6 281 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 H0YIG0 161 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 STMND1H3BQB6 276 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 VPS4BO75351 444 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 KLK1P06870 262 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 KLK3P07288 261 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-227ENST00000498056 ITGAXP20702 1163 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 PRPH2P23942 346 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 BSGP35613 385 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 TSFMP43897 325 aaKnown RBP12.85□□□□□ -0.35
CPNE1-227ENST00000498056 MAPK12P53778 367 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 SHC2P98077 582 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 ZNF763Q0D2J5 394 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 ABHD18Q0P651 414 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 CCNYL2Q5T2Q4 361 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 DSELQ8IZU8 1212 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 AMER3Q8N944 861 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 ACOT4Q8N9L9 421 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 FAM47BQ8NA70 645 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 SLC46A1Q96NT5 459 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 QRFPRQ96P65 431 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 SIKE1Q9BRV8 207 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 AKTIPQ9H8T0 292 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 TCF7L2Q9NQB0 619 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 PRDM7Q9NQW5 492 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 ADAM21Q9UKJ8 722 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 WASF3Q9UPY6 502 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 TMEM184BQ9Y519 407 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms